BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0111600 Os06g0111600|AK065637
         (986 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0111600  Acyl carrier protein-like family protein           2042   0.0  

>Os06g0111600 Acyl carrier protein-like family protein
          Length = 986

 Score = 2042 bits (5291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 986/986 (100%), Positives = 986/986 (100%)

Query: 1   MDDDLWQVFEDEKGGIGRDELAWPCKYKKPREFCYVMFTSGSTGKPKGVCGTEKGLLNRF 60
           MDDDLWQVFEDEKGGIGRDELAWPCKYKKPREFCYVMFTSGSTGKPKGVCGTEKGLLNRF
Sbjct: 1   MDDDLWQVFEDEKGGIGRDELAWPCKYKKPREFCYVMFTSGSTGKPKGVCGTEKGLLNRF 60

Query: 61  LWMQRWKPLCSDDLLLFKTSVSFVDHLQEFLSAVLTCTTLVIPPPNDWRANPASLANLIK 120
           LWMQRWKPLCSDDLLLFKTSVSFVDHLQEFLSAVLTCTTLVIPPPNDWRANPASLANLIK
Sbjct: 61  LWMQRWKPLCSDDLLLFKTSVSFVDHLQEFLSAVLTCTTLVIPPPNDWRANPASLANLIK 120

Query: 121 AYGISRMNLVPSLMEIILPSLEKNLSWGHNPLKMLIFSGENLSILLWKRVHEILPETTIV 180
           AYGISRMNLVPSLMEIILPSLEKNLSWGHNPLKMLIFSGENLSILLWKRVHEILPETTIV
Sbjct: 121 AYGISRMNLVPSLMEIILPSLEKNLSWGHNPLKMLIFSGENLSILLWKRVHEILPETTIV 180

Query: 181 NLYGTTEVSGDCTFFDCTDLPILLKREELTSVPIGFPISNCEVCIATDAEVADEGEMHVT 240
           NLYGTTEVSGDCTFFDCTDLPILLKREELTSVPIGFPISNCEVCIATDAEVADEGEMHVT
Sbjct: 181 NLYGTTEVSGDCTFFDCTDLPILLKREELTSVPIGFPISNCEVCIATDAEVADEGEMHVT 240

Query: 241 GACLFAGYLEESMASNHTEDNGSSTYYRTGDFARRLKSGEFIFLGRKDRTVKIYGQRFSL 300
           GACLFAGYLEESMASNHTEDNGSSTYYRTGDFARRLKSGEFIFLGRKDRTVKIYGQRFSL
Sbjct: 241 GACLFAGYLEESMASNHTEDNGSSTYYRTGDFARRLKSGEFIFLGRKDRTVKIYGQRFSL 300

Query: 301 QEVESTLNEHPDVSAAAVTFQNNEFLDFRAYLVLKSSAASVEDCQRRKRYKSFEVIMPSI 360
           QEVESTLNEHPDVSAAAVTFQNNEFLDFRAYLVLKSSAASVEDCQRRKRYKSFEVIMPSI
Sbjct: 301 QEVESTLNEHPDVSAAAVTFQNNEFLDFRAYLVLKSSAASVEDCQRRKRYKSFEVIMPSI 360

Query: 361 RSWLIMKLPPAMIPRFFLPMESLPLTSSGKIDYMKLSSLKCALESCETETERITVNPHLQ 420
           RSWLIMKLPPAMIPRFFLPMESLPLTSSGKIDYMKLSSLKCALESCETETERITVNPHLQ
Sbjct: 361 RSWLIMKLPPAMIPRFFLPMESLPLTSSGKIDYMKLSSLKCALESCETETERITVNPHLQ 420

Query: 421 VIKKAFSDALLVDEVSEFDDFFTLGGNSISAAHVAHKLEIDMRMLYIYSTPSKLLDALFT 480
           VIKKAFSDALLVDEVSEFDDFFTLGGNSISAAHVAHKLEIDMRMLYIYSTPSKLLDALFT
Sbjct: 421 VIKKAFSDALLVDEVSEFDDFFTLGGNSISAAHVAHKLEIDMRMLYIYSTPSKLLDALFT 480

Query: 481 KHGCLLSSSHEPHPKKGLDISSSIHSSFNPIATSVDDNFPEVKAHINGDGECAHDAISGN 540
           KHGCLLSSSHEPHPKKGLDISSSIHSSFNPIATSVDDNFPEVKAHINGDGECAHDAISGN
Sbjct: 481 KHGCLLSSSHEPHPKKGLDISSSIHSSFNPIATSVDDNFPEVKAHINGDGECAHDAISGN 540

Query: 541 YANEVDGQLNRNVPLSNDRYQTKSLLLDTCSNDRNSVDVSPWILNFCLVKKWSIGRCNRF 600
           YANEVDGQLNRNVPLSNDRYQTKSLLLDTCSNDRNSVDVSPWILNFCLVKKWSIGRCNRF
Sbjct: 541 YANEVDGQLNRNVPLSNDRYQTKSLLLDTCSNDRNSVDVSPWILNFCLVKKWSIGRCNRF 600

Query: 601 MHGYEDKLQIEDVCSYVPYNKRGYLQALWNIPLGSCVDASPLLVSNNGMLSIFIGSHSHR 660
           MHGYEDKLQIEDVCSYVPYNKRGYLQALWNIPLGSCVDASPLLVSNNGMLSIFIGSHSHR
Sbjct: 601 MHGYEDKLQIEDVCSYVPYNKRGYLQALWNIPLGSCVDASPLLVSNNGMLSIFIGSHSHR 660

Query: 661 FLCIDGCSGSVRWSVKLEGRVECSAAITGDFSEVVVGCYKGKIYFLDLLTGKQAWTIQTD 720
           FLCIDGCSGSVRWSVKLEGRVECSAAITGDFSEVVVGCYKGKIYFLDLLTGKQAWTIQTD
Sbjct: 661 FLCIDGCSGSVRWSVKLEGRVECSAAITGDFSEVVVGCYKGKIYFLDLLTGKQAWTIQTD 720

Query: 721 GEVKMQPAVDMIRNLIWCGSYDHHLYALNYKDRCCTYKISCGGSIYGSPAIDMTHNMIYV 780
           GEVKMQPAVDMIRNLIWCGSYDHHLYALNYKDRCCTYKISCGGSIYGSPAIDMTHNMIYV
Sbjct: 721 GEVKMQPAVDMIRNLIWCGSYDHHLYALNYKDRCCTYKISCGGSIYGSPAIDMTHNMIYV 780

Query: 781 ASTSGLVTAISLEVSSFKIIWQYEAGAPIFGSLAIHHHGGKVICCLVNGLVIALNSHGSV 840
           ASTSGLVTAISLEVSSFKIIWQYEAGAPIFGSLAIHHHGGKVICCLVNGLVIALNSHGSV
Sbjct: 781 ASTSGLVTAISLEVSSFKIIWQYEAGAPIFGSLAIHHHGGKVICCLVNGLVIALNSHGSV 840

Query: 841 VWKASVGGPIFAGACLSSGLPTQVLIPSRDGRLYSFDTTSGALLWKYEVGDPITASAFVD 900
           VWKASVGGPIFAGACLSSGLPTQVLIPSRDGRLYSFDTTSGALLWKYEVGDPITASAFVD
Sbjct: 841 VWKASVGGPIFAGACLSSGLPTQVLIPSRDGRLYSFDTTSGALLWKYEVGDPITASAFVD 900

Query: 901 EVLTATSPGASERFACICTSSGQVHVIRIRADAKEEKVNGSICNDLVQGFAAIDLPGDIF 960
           EVLTATSPGASERFACICTSSGQVHVIRIRADAKEEKVNGSICNDLVQGFAAIDLPGDIF
Sbjct: 901 EVLTATSPGASERFACICTSSGQVHVIRIRADAKEEKVNGSICNDLVQGFAAIDLPGDIF 960

Query: 961 SSPLMVGGRIFVGCRDDQLHCLTISS 986
           SSPLMVGGRIFVGCRDDQLHCLTISS
Sbjct: 961 SSPLMVGGRIFVGCRDDQLHCLTISS 986



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 36,145,690
Number of extensions: 1583086
Number of successful extensions: 3130
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3129
Number of HSP's successfully gapped: 1
Length of query: 986
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 875
Effective length of database: 11,240,047
Effective search space: 9835041125
Effective search space used: 9835041125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 161 (66.6 bits)