BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0346500 Os05g0346500|AK112067
         (696 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0346500  Glycoside hydrolase, family 85 protein             1313   0.0  
Os06g0306000                                                      208   1e-53

>Os05g0346500 Glycoside hydrolase, family 85 protein
          Length = 696

 Score = 1313 bits (3399), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/696 (91%), Positives = 638/696 (91%)

Query: 1   MLPSXXXXXXXXXXXXXXXXXXWEPPFDASQPAPPISYPITTLAALASRAYLSEAGNFHL 60
           MLPS                  WEPPFDASQPAPPISYPITTLAALASRAYLSEAGNFHL
Sbjct: 1   MLPSAAPAAAAGEEEEEGERRPWEPPFDASQPAPPISYPITTLAALASRAYLSEAGNFHL 60

Query: 61  PFNXXXXXXXXXXXXXXXXILACHDFRGGYRDDAAPQGGHDPGAYALWHWHLIDVFVYFS 120
           PFN                ILACHDFRGGYRDDAAPQGGHDPGAYALWHWHLIDVFVYFS
Sbjct: 61  PFNRASSSPRAAPLPPRRRILACHDFRGGYRDDAAPQGGHDPGAYALWHWHLIDVFVYFS 120

Query: 121 HYLVTLPPPCWVNAAHLHGVKVLGTFITEWEKGAEICEEMLATEASAQMYAERLTELAAY 180
           HYLVTLPPPCWVNAAHLHGVKVLGTFITEWEKGAEICEEMLATEASAQMYAERLTELAAY
Sbjct: 121 HYLVTLPPPCWVNAAHLHGVKVLGTFITEWEKGAEICEEMLATEASAQMYAERLTELAAY 180

Query: 181 LGFDGWLINIEVKLDIQFIDNLKEFINHLTKTMHAAVPGSLVIWYDAITIKGALDWQNKL 240
           LGFDGWLINIEVKLDIQFIDNLKEFINHLTKTMHAAVPGSLVIWYDAITIKGALDWQNKL
Sbjct: 181 LGFDGWLINIEVKLDIQFIDNLKEFINHLTKTMHAAVPGSLVIWYDAITIKGALDWQNKL 240

Query: 241 NEYNKPFFDLCDGLFSNYTWKAKYPQESAVVAGERKYDVYMGIDVYGRNTFGGGQWNTNV 300
           NEYNKPFFDLCDGLFSNYTWKAKYPQESAVVAGERKYDVYMGIDVYGRNTFGGGQWNTNV
Sbjct: 241 NEYNKPFFDLCDGLFSNYTWKAKYPQESAVVAGERKYDVYMGIDVYGRNTFGGGQWNTNV 300

Query: 301 ALDLLKKDDVSAAIFAPGWVYETKQPPNFRTAQNRWWGLVQESWGVLQSYPKQLPFYSDF 360
           ALDLLKKDDVSAAIFAPGWVYETKQPPNFRTAQNRWWGLVQESWGVLQSYPKQLPFYSDF
Sbjct: 301 ALDLLKKDDVSAAIFAPGWVYETKQPPNFRTAQNRWWGLVQESWGVLQSYPKQLPFYSDF 360

Query: 361 DQGHGYQVSIEGVKVYGAPWDNISCQSFQPMLKYAGDRGLQTVINFEDEPYSGGNCVTVK 420
           DQGHGYQVSIEGVKVYGAPWDNISCQSFQPMLKYAGDRGLQTVINFEDEPYSGGNCVTVK
Sbjct: 361 DQGHGYQVSIEGVKVYGAPWDNISCQSFQPMLKYAGDRGLQTVINFEDEPYSGGNCVTVK 420

Query: 421 GSLQQNEIFSEQLFNGGLSMEGESVYVFYSVKAXXXXXXXXXXXXXXXXXXXXXXXXADD 480
           GSLQQNEIFSEQLFNGGLSMEGESVYVFYSVKA                        ADD
Sbjct: 421 GSLQQNEIFSEQLFNGGLSMEGESVYVFYSVKADERSGLGLSLDLSSGNNESSSILIADD 480

Query: 481 TAAFTRKKQHRKYGSYVKADKAEPHTPVHQNWVVYKATILPSAGFTLTGINIVCTMKTTS 540
           TAAFTRKKQHRKYGSYVKADKAEPHTPVHQNWVVYKATILPSAGFTLTGINIVCTMKTTS
Sbjct: 481 TAAFTRKKQHRKYGSYVKADKAEPHTPVHQNWVVYKATILPSAGFTLTGINIVCTMKTTS 540

Query: 541 GTDPETDGDGSSEAGANRSLHYHASLGHVSIRNTEETEFPPARSWVTEGDYISWSNGSDE 600
           GTDPETDGDGSSEAGANRSLHYHASLGHVSIRNTEETEFPPARSWVTEGDYISWSNGSDE
Sbjct: 541 GTDPETDGDGSSEAGANRSLHYHASLGHVSIRNTEETEFPPARSWVTEGDYISWSNGSDE 600

Query: 601 SKLASLKISWELENKQQAPFMKYNVYVEKLTADSNAKAPRIFLGVASVQVFYVSDLEVPS 660
           SKLASLKISWELENKQQAPFMKYNVYVEKLTADSNAKAPRIFLGVASVQVFYVSDLEVPS
Sbjct: 601 SKLASLKISWELENKQQAPFMKYNVYVEKLTADSNAKAPRIFLGVASVQVFYVSDLEVPS 660

Query: 661 EVTALKFFIQPCGRDGSCQGLHECPKFHLVPVDSAM 696
           EVTALKFFIQPCGRDGSCQGLHECPKFHLVPVDSAM
Sbjct: 661 EVTALKFFIQPCGRDGSCQGLHECPKFHLVPVDSAM 696



>Os06g0306000 
          Length = 354

 Score =  208 bits (530), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/161 (68%), Positives = 116/161 (72%), Gaps = 12/161 (7%)

Query: 23  WEPPFDASQPAPPISYPITTLAALASRAYLSEAGNFHLPFNXXXXXXXXXXX-----XXX 77
           WEPPFDAS PAPPISYPITTLAALASRAYLSE GNFHLPFN                   
Sbjct: 45  WEPPFDASLPAPPISYPITTLAALASRAYLSEDGNFHLPFNRASVPALASSPWAAPLPPR 104

Query: 78  XXILACHDFRGGYRDDAAPQGGHDPGAYALWHWHLIDVFVYFSHYLVTLPPPCWVNAAHL 137
             ILACHD RGGYRD+AAPQGG DPGAYALWHWHL+DVFVYFSHYL      C   AA L
Sbjct: 105 RHILACHDLRGGYRDNAAPQGGDDPGAYALWHWHLVDVFVYFSHYL------CHALAAVL 158

Query: 138 HGVKVLGTFITEWEKGAEICEEMLATEASAQMYAERLTELA 178
            G +       EW+K AEIC+EMLATEASAQMYAERLTELA
Sbjct: 159 -GQRRPPPRRQEWDKVAEICKEMLATEASAQMYAERLTELA 198



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,585,430
Number of extensions: 1048784
Number of successful extensions: 2138
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2134
Number of HSP's successfully gapped: 2
Length of query: 696
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 588
Effective length of database: 11,396,689
Effective search space: 6701253132
Effective search space used: 6701253132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)