BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0185800 Os05g0185800|AK065050
         (617 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0185800  Conserved hypothetical protein                     1005   0.0  
Os11g0105750  Quinonprotein alcohol dehydrogenase-like domai...   157   3e-38

>Os05g0185800 Conserved hypothetical protein
          Length = 617

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/617 (83%), Positives = 518/617 (83%)

Query: 1   MPKVAXXXXXXXRRSEDLRVVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDG 60
           MPKVA       RRSEDLRVVF                                  DSDG
Sbjct: 1   MPKVAGDGGGGGRRSEDLRVVFLRVGAAVALSVAGLLLSRRRPRQQLRLPPPPPRSDSDG 60

Query: 61  MKGGGGLKDELRILKNEDTKAKIINGNSVHXXXXXXXXXXXALVPLPPKCRTLDDDEEFL 120
           MKGGGGLKDELRILKNEDTKAKIINGNSVH           ALVPLPPKCRTLDDDEEFL
Sbjct: 61  MKGGGGLKDELRILKNEDTKAKIINGNSVHTTTTTTTMTTTALVPLPPKCRTLDDDEEFL 120

Query: 121 LPEFNEIVLKEFGRDMGNIATSPAPRVSEEDATKTPEIFELREMVRSLQEREKTLELQLL 180
           LPEFNEIVLKEFGRDMGNIATSPAPRVSEEDATKTPEIFELREMVRSLQEREKTLELQLL
Sbjct: 121 LPEFNEIVLKEFGRDMGNIATSPAPRVSEEDATKTPEIFELREMVRSLQEREKTLELQLL 180

Query: 181 ESYGLQEQDVAVRELENQLKINTVESKLYTLKIESLQSENERLQAQLTESSKLASELEAA 240
           ESYGLQEQDVAVRELENQLKINTVESKLYTLKIESLQSENERLQAQLTESSKLASELEAA
Sbjct: 181 ESYGLQEQDVAVRELENQLKINTVESKLYTLKIESLQSENERLQAQLTESSKLASELEAA 240

Query: 241 RMXXXXXXXXXRQDAEQAKERIASLQEMADSWQCKEIITEGKFSAXXXXXXXXXXXXXXX 300
           RM         RQDAEQAKERIASLQEMADSWQCKEIITEGKFSA               
Sbjct: 241 RMKCKLLKKKLRQDAEQAKERIASLQEMADSWQCKEIITEGKFSAEVEEKLSKLEELENE 300

Query: 301 XXXXXVVNSRLQQENAHLARRLELTRLPPVPKPINNMEVKALQEADHLRQENDKLAKEVE 360
                VVNSRLQQENAHLARRLELTRLPPVPKPINNMEVKALQEADHLRQENDKLAKEVE
Sbjct: 301 ARELRVVNSRLQQENAHLARRLELTRLPPVPKPINNMEVKALQEADHLRQENDKLAKEVE 360

Query: 361 QLKTDRFSDVEELVYLKWINACLRYELRNQDAPSGKNVARDLSKTLSPQSEEKAKQLIME 420
           QLKTDRFSDVEELVYLKWINACLRYELRNQDAPSGKNVARDLSKTLSPQSEEKAKQLIME
Sbjct: 361 QLKTDRFSDVEELVYLKWINACLRYELRNQDAPSGKNVARDLSKTLSPQSEEKAKQLIME 420

Query: 421 YANAGPDEKNFDHIEFCSEYSSSRASSLGEPDDASIDVSLMXXXXXXXXXXXXXXXXXXV 480
           YANAGPDEKNFDHIEFCSEYSSSRASSLGEPDDASIDVSLM                  V
Sbjct: 421 YANAGPDEKNFDHIEFCSEYSSSRASSLGEPDDASIDVSLMNKHKNPKKKKFFSKLRKLV 480

Query: 481 LGKEKENKTIPTLERRISISSCSFDEFNGRESIDSYSSFMTEPGNSGNQQHDNHGSRWHS 540
           LGKEKENKTIPTLERRISISSCSFDEFNGRESIDSYSSFMTEPGNSGNQQHDNHGSRWHS
Sbjct: 481 LGKEKENKTIPTLERRISISSCSFDEFNGRESIDSYSSFMTEPGNSGNQQHDNHGSRWHS 540

Query: 541 MDSQSARHLSKEIADARNLHLGVKSVSFGEGRVSNFGHSSHLGNGEATVPEDAKKIHKFA 600
           MDSQSARHLSKEIADARNLHLGVKSVSFGEGRVSNFGHSSHLGNGEATVPEDAKKIHKFA
Sbjct: 541 MDSQSARHLSKEIADARNLHLGVKSVSFGEGRVSNFGHSSHLGNGEATVPEDAKKIHKFA 600

Query: 601 EALKTSRPGSRSSRKDH 617
           EALKTSRPGSRSSRKDH
Sbjct: 601 EALKTSRPGSRSSRKDH 617



>Os11g0105750 Quinonprotein alcohol dehydrogenase-like domain containing protein
          Length = 918

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/270 (39%), Positives = 146/270 (54%), Gaps = 8/270 (2%)

Query: 157 EIFELREMVRSLQEREKTLELQLLESYGLQEQDVAVRELENQLKINTVESKLYTLKIESL 216
           E+  LR +VR L+ERE  LE +LLE YGL+EQ+  V EL  QLKI  VE  +  + I SL
Sbjct: 104 ELERLRGLVRELEEREVKLEGELLEYYGLKEQETDVVELHRQLKIKMVEIDMLKMTINSL 163

Query: 217 QSENERLQAQLTESSKLASELEAARMXXXXXXXXXRQDAEQAKERIASLQEMADSWQCKE 276
           Q E ++LQ  +   +    ELEAAR          + +A Q K ++  L+    + + KE
Sbjct: 164 QEERKKLQDDVARGTGAKRELEAARNKIKELQRQIQMEANQTKGQLMLLKNQVIALKSKE 223

Query: 277 IITEGKFSAXXXXXXXXXXXXXXXXXXXXVVNSRLQQENAHLARRLELTRLPPVPKPINN 336
                   A                    VV  R + +     +R  + +L      I  
Sbjct: 224 ------EEAAIKDAEVQRKLKKLKELEVEVVELRRKNKELLYEKRDLIVKLDAAQGKITE 277

Query: 337 MEV--KALQEADHLRQENDKLAKEVEQLKTDRFSDVEELVYLKWINACLRYELRNQDAPS 394
            +V   A +E + LR  N+ L K+VE L+ +RFS+VEELVYL+W+NACLRYELRN  APS
Sbjct: 278 SDVVSHAREEINKLRHVNEDLTKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQAPS 337

Query: 395 GKNVARDLSKTLSPQSEEKAKQLIMEYANA 424
            K  AR L+KTLSP+S E+AK L++EYA +
Sbjct: 338 EKISARYLNKTLSPKSRERAKLLMLEYAGS 367



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.310    0.128    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,915,951
Number of extensions: 631540
Number of successful extensions: 1710
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1707
Number of HSP's successfully gapped: 2
Length of query: 617
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 510
Effective length of database: 11,448,903
Effective search space: 5838940530
Effective search space used: 5838940530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 159 (65.9 bits)