BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0192800 Os04g0192800|Os04g0192800
(99 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0192800 205 7e-54
Os02g0455500 186 3e-48
Os12g0284600 185 5e-48
Os10g0195550 181 1e-46
Os04g0193000 174 2e-44
Os06g0602301 169 6e-43
Os08g0261700 167 1e-42
Os10g0364300 165 8e-42
Os07g0236100 157 2e-39
Os07g0236000 155 4e-39
Os10g0382800 139 3e-34
Os11g0254700 114 2e-26
Os05g0572200 92 8e-20
Os04g0222800 88 2e-18
Os04g0222400 87 4e-18
Os06g0359600 75 9e-15
Os01g0386100 66 7e-12
>Os04g0192800
Length = 99
Score = 205 bits (521), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP
Sbjct: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV
Sbjct: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
>Os02g0455500
Length = 99
Score = 186 bits (472), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 92/99 (92%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAK MEQE RE KSRASALPGQRRLRRRVQGEDYLPKED+FALASSPP+GPKKPFRPIKP
Sbjct: 1 MAKTMEQEWREAKSRASALPGQRRLRRRVQGEDYLPKEDDFALASSPPRGPKKPFRPIKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
GNR GDRQ AHQGPMSPY+IMYPCKC FHKGNHVNSPV
Sbjct: 61 RGNRAGDRQMAHQGPMSPYIIMYPCKCPFHKGNHVNSPV 99
>Os12g0284600
Length = 99
Score = 185 bits (470), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 92/99 (92%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAK MEQER E KSRASALPGQR LRRRVQGEDYLPKED+FALASSPP+GPKKPFRPIKP
Sbjct: 1 MAKTMEQERHEAKSRASALPGQRHLRRRVQGEDYLPKEDDFALASSPPRGPKKPFRPIKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
GNR GDRQTAHQGPMSPY+IMYPCKC FH+GNHVNSPV
Sbjct: 61 RGNRAGDRQTAHQGPMSPYIIMYPCKCPFHQGNHVNSPV 99
>Os10g0195550
Length = 99
Score = 181 bits (459), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 91/99 (91%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAKAM QERR+ KSR SALPGQRRLRRRVQGEDYLPKED+FALASSPPQGPKKPFRPIKP
Sbjct: 1 MAKAMGQERRKAKSRTSALPGQRRLRRRVQGEDYLPKEDDFALASSPPQGPKKPFRPIKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
GNR GDRQTAHQGPMSPY+IMY KC FHKGNHVNSPV
Sbjct: 61 RGNRAGDRQTAHQGPMSPYIIMYLYKCPFHKGNHVNSPV 99
>Os04g0193000
Length = 750
Score = 174 bits (440), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 86/95 (90%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAKAMEQERRE KSRASALPGQRRLRRRVQGEDYLPKED+FALASSPPQ PKKPFRPIKP
Sbjct: 1 MAKAMEQERREAKSRASALPGQRRLRRRVQGEDYLPKEDDFALASSPPQRPKKPFRPIKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHV 95
NRV DRQTAHQGPMSPY+IMYPCKC FHK V
Sbjct: 61 RVNRVDDRQTAHQGPMSPYIIMYPCKCPFHKAGAV 95
>Os06g0602301
Length = 137
Score = 169 bits (427), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 86/99 (86%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
+AKAMEQER E KSR SALPGQ RL RRVQGEDYLPKEDNFA+ASSPPQGP+K FRPIKP
Sbjct: 35 VAKAMEQERHEAKSRTSALPGQGRLGRRVQGEDYLPKEDNFAMASSPPQGPRKLFRPIKP 94
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
G R GDRQTAHQGPMS Y IMYPCKC F KGNHVNSPV
Sbjct: 95 KGYRAGDRQTAHQGPMSSYNIMYPCKCPFRKGNHVNSPV 133
>Os08g0261700
Length = 142
Score = 167 bits (424), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 88/99 (88%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
+AKAMEQERRE KSR SALPGQRRLRRRVQGE YLPKED+FA+ASSPP+GPKKPFRP+KP
Sbjct: 44 VAKAMEQERREAKSRTSALPGQRRLRRRVQGEVYLPKEDDFAMASSPPRGPKKPFRPVKP 103
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
G R GDRQTAHQGPMSP IMYPCK F KGNHVNSPV
Sbjct: 104 RGYRAGDRQTAHQGPMSPCNIMYPCKRPFRKGNHVNSPV 142
>Os10g0364300
Length = 868
Score = 165 bits (417), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAKAMEQERRE KSR SALPGQRRLRRRVQGEDYLPKED+FA+ASS +GPKKPF P+KP
Sbjct: 1 MAKAMEQERREAKSRTSALPGQRRLRRRVQGEDYLPKEDDFAIASSSSRGPKKPFWPVKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVN 96
G R GDRQTAHQGPMSPY IMY CKC F KGNH++
Sbjct: 61 RGYRAGDRQTAHQGPMSPYNIMYLCKCPFRKGNHLS 96
>Os07g0236100
Length = 181
Score = 157 bits (397), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 81/95 (85%)
Query: 5 MEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKPGGNR 64
MEQERRE KSR SALPGQRRLRRRVQGEDYLPKED+FA+ASSP +GP+KPFRPIKP G R
Sbjct: 1 MEQERREAKSRTSALPGQRRLRRRVQGEDYLPKEDDFAMASSPLRGPRKPFRPIKPRGYR 60
Query: 65 VGDRQTAHQGPMSPYVIMYPCKCSFHKGNHVNSPV 99
GDRQTAHQGPMSPY IMYPCKC F K + + V
Sbjct: 61 AGDRQTAHQGPMSPYNIMYPCKCPFRKVVILTTTV 95
>Os07g0236000
Length = 128
Score = 155 bits (393), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 78/87 (89%)
Query: 5 MEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKPGGNR 64
MEQERRE KSR SALPGQRRLRRRVQ EDYLPKED+FA+ASSPPQGP+KPFRPIKP G R
Sbjct: 1 MEQERREAKSRTSALPGQRRLRRRVQDEDYLPKEDDFAMASSPPQGPRKPFRPIKPRGYR 60
Query: 65 VGDRQTAHQGPMSPYVIMYPCKCSFHK 91
GDRQTAHQGPMSPY IMYPCKC F K
Sbjct: 61 AGDRQTAHQGPMSPYNIMYPCKCPFRK 87
>Os10g0382800
Length = 168
Score = 139 bits (351), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 73/88 (82%)
Query: 5 MEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKPGGNR 64
MEQE+RE KSR SALPGQRRL RRVQGEDYLPKE +FALASSPP+G KKPFRPIKP G R
Sbjct: 1 MEQEQREAKSRTSALPGQRRLGRRVQGEDYLPKEGDFALASSPPRGLKKPFRPIKPRGYR 60
Query: 65 VGDRQTAHQGPMSPYVIMYPCKCSFHKG 92
GDRQTAHQGPMSPY IMYP S G
Sbjct: 61 AGDRQTAHQGPMSPYNIMYPFVISTTAG 88
>Os11g0254700
Length = 365
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 63/85 (74%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAKAMEQ RRE +RA LPGQR L RR+ G+ Y+ K D+FA+ASSPPQGPKKPFR KP
Sbjct: 1 MAKAMEQGRREAGNRAGTLPGQRPLGRRMLGKVYMSKADDFAIASSPPQGPKKPFRTFKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPC 85
GN DR AHQGPM+ IMYPC
Sbjct: 61 RGNWADDRLVAHQGPMNLNYIMYPC 85
>Os05g0572200
Length = 171
Score = 92.0 bits (227), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 57/92 (61%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MA MEQ +RE K R LP +R L RR QGE+Y+PK D+FA ASSP +G + FRPIKP
Sbjct: 1 MANTMEQVQREAKDRVGTLPSRRPLGRRTQGEEYMPKGDDFAKASSPREGQRSLFRPIKP 60
Query: 61 GGNRVGDRQTAHQGPMSPYVIMYPCKCSFHKG 92
G+ DR TAHQ M+ Y MY S G
Sbjct: 61 RGHWADDRLTAHQESMNLYYTMYSFVVSTTAG 92
>Os04g0222800
Length = 198
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 49/60 (81%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAK MEQERR + RAS L QR L RRVQGE+Y+P+ED+FA ASSPP+ PKKPFRPIKP
Sbjct: 1 MAKTMEQERRGARDRASTLSSQRPLGRRVQGEEYIPEEDDFATASSPPRVPKKPFRPIKP 60
>Os04g0222400
Length = 132
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 48/60 (80%)
Query: 1 MAKAMEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALASSPPQGPKKPFRPIKP 60
MAK ME ERR + RAS L QR L RRVQGE+Y+P+ED+FA ASSPP+GPKKPFRPI P
Sbjct: 1 MAKTMEHERRGARDRASTLSSQRPLGRRVQGEEYIPEEDDFATASSPPRGPKKPFRPINP 60
>Os06g0359600
Length = 360
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 37/40 (92%)
Query: 5 MEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALA 44
MEQE RE KSR SALPGQRRLRRRVQGEDYLPKED+FA+A
Sbjct: 1 MEQEWRETKSRTSALPGQRRLRRRVQGEDYLPKEDDFAMA 40
>Os01g0386100
Length = 172
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 5 MEQERREVKSRASALPGQRRLRRRVQGEDYLPKEDNFALA 44
MEQERRE KSR AL GQ RL RRVQGEDYLPKED+FA+A
Sbjct: 1 MEQERREAKSRTRALLGQGRLGRRVQGEDYLPKEDDFAMA 40
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,989,205
Number of extensions: 171334
Number of successful extensions: 601
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 601
Number of HSP's successfully gapped: 17
Length of query: 99
Length of database: 17,035,801
Length adjustment: 68
Effective length of query: 31
Effective length of database: 13,485,249
Effective search space: 418042719
Effective search space used: 418042719
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 149 (62.0 bits)