BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0857600 Os03g0857600|AK100733
(266 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0857600 Protein of unknown function DUF303, acetyleste... 423 e-119
Os03g0857500 Protein of unknown function DUF303, acetyleste... 264 4e-71
Os04g0276600 Conserved hypothetical protein 219 1e-57
Os04g0110400 Protein of unknown function DUF303, acetyleste... 124 5e-29
>Os03g0857600 Protein of unknown function DUF303, acetylesterase putative domain
containing protein
Length = 266
Score = 423 bits (1087), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/235 (90%), Positives = 212/235 (90%)
Query: 32 IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV 91
IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV
Sbjct: 32 IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV 91
Query: 92 LGVGPGMSFAHALFRAIPPSTVIGLVPCAQGGTPIANWTRGTELYEXXXXXXXXXXXXXX 151
LGVGPGMSFAHALFRAIPPSTVIGLVPCAQGGTPIANWTRGTELYE
Sbjct: 92 LGVGPGMSFAHALFRAIPPSTVIGLVPCAQGGTPIANWTRGTELYERMVGRGRAAMATAG 151
Query: 152 XXXXXXXXXLLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQG 211
LLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQG
Sbjct: 152 AGAGARMGALLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQG 211
Query: 212 KFVEPVREAQKAVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLSTL 266
KFVEPVREAQKAVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLSTL
Sbjct: 212 KFVEPVREAQKAVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLSTL 266
>Os03g0857500 Protein of unknown function DUF303, acetylesterase putative domain
containing protein
Length = 252
Score = 264 bits (675), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 32 IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV 91
+F+LGGQSNM GRGG WDG+VPPECAP+P ILRLSP+LRWEEA EPLH GID +
Sbjct: 20 VFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDSNRT 79
Query: 92 LGVGPGMSFAHALFRAIPPSTVIGLVPCAQGGTPIANWTRGTELYEXXXXXXXXXXXXXX 151
GVGPGMSFA+AL R+ VIGLVPCA GGT +A+W +GT+LY
Sbjct: 80 CGVGPGMSFANALLRS-GQFPVIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVALETGG 138
Query: 152 XXXXXXXXXLLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQG 211
+LWYQGE+DT+R DA YAR+M +VR++R DLA+P LL+IQVG+A+G G
Sbjct: 139 RIGA-----VLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGLG 193
Query: 212 KFVEPVREAQKAVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLS 264
++ E VREAQK ++L +++VDAKGLP+ + + HL+T AQV+LG +LA+AYL+
Sbjct: 194 QYTEVVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHMLAQAYLN 246
>Os04g0276600 Conserved hypothetical protein
Length = 237
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 143/236 (60%), Gaps = 7/236 (2%)
Query: 32 IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV 91
IF+L GQSNM GRGG + WDGVVPPECAP P +LRL+ L W EAREPLHA ID
Sbjct: 3 IFVLSGQSNMAGRGGVHHRRWDGVVPPECAPCPSVLRLTAALDWVEAREPLHADIDTAKT 62
Query: 92 LGVGPGMSFAHALF-RAIPPSTVIGLVPCAQGGTPIANWTRGTELYEXXXXXXXXXXXXX 150
GVGPGM+FA A+ R PP + +GLVPCA GGT I W RG LY+
Sbjct: 63 CGVGPGMAFARAVLPRLDPPGSGVGLVPCAVGGTAIREWARGERLYD------QMVRRAR 116
Query: 151 XXXXXXXXXXLLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQ 210
+ WYQGE+D YA +E ++ +VR DL +P+L IQV +A+G
Sbjct: 117 AAAECGEIEAVQWYQGESDAESDAATAAYAGNLETLIANVREDLGMPQLPFIQVALASGN 176
Query: 211 GKFVEPVREAQKAVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLSTL 266
K +E VR+AQ + LP + VDA GL + D+ HLTT +QVKLG++LA+ Y+S
Sbjct: 177 KKNIEKVRKAQLGINLPNVVTVDAFGLSLNEDHLHLTTESQVKLGEMLAQVYMSNF 232
>Os04g0110400 Protein of unknown function DUF303, acetylesterase putative domain
containing protein
Length = 252
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 32 IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV 91
+FLL GQSNM GRG +PP P PR+LRL+ RW A PLHA ID H
Sbjct: 53 LFLLAGQSNMAGRGALAR-----PLPPPYLPHPRLLRLAASRRWVPAAPPLHADIDTHKT 107
Query: 92 LGVGPGMSFAHALFRAIPPSTVIGLVPCAQGGTPIANWTRGTELYEXXXXXXXXXXXXXX 151
G+GP M FAH L V+GLVPCA GGT I W RG LYE
Sbjct: 108 CGLGPAMPFAHRLLLQTDSEEVLGLVPCAVGGTRIWMWARGQPLYE----AAVARARAAV 163
Query: 152 XXXXXXXXXLLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATG 209
+LW+QGE+DTI +DA Y KME +V D+R DL LP LLVIQV + +
Sbjct: 164 ADGGGAIGAVLWFQGESDTIELDDARSYGGKMERLVADLRADLHLPNLLVIQVNLFSS 221
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,546,547
Number of extensions: 377199
Number of successful extensions: 1109
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1102
Number of HSP's successfully gapped: 4
Length of query: 266
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 167
Effective length of database: 11,866,615
Effective search space: 1981724705
Effective search space used: 1981724705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)