BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0857500 Os03g0857500|AK072880
(252 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0857500 Protein of unknown function DUF303, acetyleste... 484 e-137
Os03g0857600 Protein of unknown function DUF303, acetyleste... 269 2e-72
Os04g0276600 Conserved hypothetical protein 250 6e-67
Os04g0110400 Protein of unknown function DUF303, acetyleste... 142 3e-34
>Os03g0857500 Protein of unknown function DUF303, acetylesterase putative domain
containing protein
Length = 252
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 17 NKVVFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDS 76
NKVVFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDS
Sbjct: 17 NKVVFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDS 76
Query: 77 NRTCGVGPGMSFANALLRSGQFPVIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVALET 136
NRTCGVGPGMSFANALLRSGQFPVIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVALET
Sbjct: 77 NRTCGVGPGMSFANALLRSGQFPVIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVALET 136
Query: 137 GGRIGAVLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGLGQYT 196
GGRIGAVLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGLGQYT
Sbjct: 137 GGRIGAVLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGLGQYT 196
Query: 197 EVVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHMLAQAYLNYGTSTL 252
EVVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHMLAQAYLNYGTSTL
Sbjct: 197 EVVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHMLAQAYLNYGTSTL 252
>Os03g0857600 Protein of unknown function DUF303, acetylesterase putative domain
containing protein
Length = 266
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/233 (58%), Positives = 176/233 (75%), Gaps = 6/233 (2%)
Query: 20 VFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDSNRT 79
+F+LGGQSNM GRGG WDG+VPPECAP+P ILRLSP+LRWEEA EPLH GID +
Sbjct: 32 IFLLGGQSNMGGRGGATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNV 91
Query: 80 CGVGPGMSFANALLRS-GQFPVIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVALETGG 138
GVGPGMSFA+AL R+ VIGLVPCA GGT +A+W +GT+LY +V R R A+ T G
Sbjct: 92 LGVGPGMSFAHALFRAIPPSTVIGLVPCAQGGTPIANWTRGTELYERMVGRGRAAMATAG 151
Query: 139 RIGA-----VLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGLG 193
+LWYQGE+DT+R DA YAR+M +VR++R DLA+P LL+IQVG+A+G G
Sbjct: 152 AGAGARMGALLWYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQG 211
Query: 194 QYTEVVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHMLAQAYLN 246
++ E VREAQK ++L +++VDAKGLP+ + + HL+T AQV+LG +LA+AYL+
Sbjct: 212 KFVEPVREAQKAVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLS 264
>Os04g0276600 Conserved hypothetical protein
Length = 237
Score = 250 bits (639), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 20 VFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDSNRT 79
+F+L GQSNMAGRGGV WDG+VPPECAP PS+LRL+ L W EA EPLH ID+ +T
Sbjct: 3 IFVLSGQSNMAGRGGVHHRRWDGVVPPECAPCPSVLRLTAALDWVEAREPLHADIDTAKT 62
Query: 80 CGVGPGMSFANALLRSGQFP--VIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVALETG 137
CGVGPGM+FA A+L P +GLVPCAVGGT + +WA+G LY +VRR+R A E
Sbjct: 63 CGVGPGMAFARAVLPRLDPPGSGVGLVPCAVGGTAIREWARGERLYDQMVRRARAAAEC- 121
Query: 138 GRIGAVLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGLGQYTE 197
G I AV WYQGESD A YA + L+ N+R DL MP L IQV LASG + E
Sbjct: 122 GEIEAVQWYQGESDAESDAATAAYAGNLETLIANVREDLGMPQLPFIQVALASGNKKNIE 181
Query: 198 VVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHMLAQAYLN 246
VR+AQ GI L NV VDA GL L + HLHL+T++QV+LG MLAQ Y++
Sbjct: 182 KVRKAQLGINLPNVVTVDAFGLSLNEDHLHLTTESQVKLGEMLAQVYMS 230
>Os04g0110400 Protein of unknown function DUF303, acetylesterase putative domain
containing protein
Length = 252
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 120/177 (67%), Gaps = 7/177 (3%)
Query: 18 KVVFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQLRWEEAHEPLHNGIDSN 77
K++F+L GQSNMAGRG + +PP P+P +LRL+ RW A PLH ID++
Sbjct: 51 KLLFLLAGQSNMAGRGALARP-----LPPPYLPHPRLLRLAASRRWVPAAPPLHADIDTH 105
Query: 78 RTCGVGPGMSFAN-ALLRSGQFPVIGLVPCAVGGTRMADWAKGTDLYSDLVRRSRVAL-E 135
+TCG+GP M FA+ LL++ V+GLVPCAVGGTR+ WA+G LY V R+R A+ +
Sbjct: 106 KTCGLGPAMPFAHRLLLQTDSEEVLGLVPCAVGGTRIWMWARGQPLYEAAVARARAAVAD 165
Query: 136 TGGRIGAVLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPHLLLIQVGLASGL 192
GG IGAVLW+QGESDT+ DA Y +M LV +LRADL +P+LL+IQV L S L
Sbjct: 166 GGGAIGAVLWFQGESDTIELDDARSYGGKMERLVADLRADLHLPNLLVIQVNLFSSL 222
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,716,963
Number of extensions: 392063
Number of successful extensions: 757
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 750
Number of HSP's successfully gapped: 4
Length of query: 252
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 154
Effective length of database: 11,918,829
Effective search space: 1835499666
Effective search space used: 1835499666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)