BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0722600 Os03g0722600|J075145A04
         (342 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0722600  CAP protein family protein                          531   e-151
Os08g0447900  Similar to Adenylyl cyclase associated protein      267   9e-72

>Os03g0722600 CAP protein family protein
          Length = 342

 Score =  531 bits (1368), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/295 (89%), Positives = 263/295 (89%)

Query: 48  IVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPASMADAQ 107
           IVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPASMADAQ
Sbjct: 48  IVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPASMADAQ 107

Query: 108 DFFKPLNDVIAKAIAMTEGRRPDYFNHIKSVADSLTALAWVGFLGKDCGMSFPTAHVEES 167
           DFFKPLNDVIAKAIAMTEGRRPDYFNHIKSVADSLTALAWVGFLGKDCGMSFPTAHVEES
Sbjct: 108 DFFKPLNDVIAKAIAMTEGRRPDYFNHIKSVADSLTALAWVGFLGKDCGMSFPTAHVEES 167

Query: 168 WQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSWGPVGGAPVS 227
           WQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSWGPVGGAPVS
Sbjct: 168 WQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSWGPVGGAPVS 227

Query: 228 QXXXXXXXXXXXXXXXXXXXXXXXXXLFTTEKSPKSAQPKEGMSAVFQEISSGKAVTTGL 287
           Q                         LFTTEKSPKSAQPKEGMSAVFQEISSGKAVTTGL
Sbjct: 228 QPKATAPAPKAPGAKAPPPPALPSAPLFTTEKSPKSAQPKEGMSAVFQEISSGKAVTTGL 287

Query: 288 RKVTDDMKTKNRSDRSGVVSSSTXXXXXXXEKTSRAGSFSFKSGPPKLELQMGRK 342
           RKVTDDMKTKNRSDRSGVVSSST       EKTSRAGSFSFKSGPPKLELQMGRK
Sbjct: 288 RKVTDDMKTKNRSDRSGVVSSSTAAPAAAPEKTSRAGSFSFKSGPPKLELQMGRK 342



>Os08g0447900 Similar to Adenylyl cyclase associated protein
          Length = 464

 Score =  267 bits (682), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 153/295 (51%), Positives = 192/295 (65%), Gaps = 25/295 (8%)

Query: 48  IVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPASMADAQ 107
           I+A+DE VAGAVGR++AAA KIG +V + T+VL +AF V KD LV+ KQ QKP ++    
Sbjct: 45  ILAFDELVAGAVGRVSAAAGKIGAEVAEVTRVLEKAFLVGKDLLVRTKQTQKP-TVDSIA 103

Query: 108 DFFKPLNDVIAKAIAMTEGRRPDYFNHIKSVADSLTALAWVGFLGKDCGMSFPTAHVEES 167
            F  PLN+ I +A ++ EG R  + NH+K+ A SL ALAW+G+ GK CGM  P AHVEES
Sbjct: 104 VFMGPLNETILEANSLAEGTRSSHGNHLKAAAGSLAALAWIGYTGKGCGMPLPIAHVEES 163

Query: 168 WQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSWGPVGGAPVS 227
           WQMAEFY+NKVLVEY++KD DHVEWAKALKEL++P LRD+VK  YPLGP W P G +   
Sbjct: 164 WQMAEFYSNKVLVEYKSKDPDHVEWAKALKELFVPSLRDYVKTFYPLGPVWQPPGSS--- 220

Query: 228 QXXXXXXXXXXXXXXXXXXXXXXXXXLFTTEKSPKSAQPKEGMSAVFQEISSGKAVTTGL 287
                                           S +S+QPK GMSAVF EISSGK++T GL
Sbjct: 221 --------------TSKAPSAPCPPSASLFSSSAQSSQPKTGMSAVFAEISSGKSMTQGL 266

Query: 288 RKVTDDMKTKNRSDRSGVVSSSTXXXXXXXEKTSRAGSFSFKSGPPKLELQMGRK 342
           R VT DMK+KNR+DR+GVV++         ++  +  S S    P KLELQMGRK
Sbjct: 267 RTVTADMKSKNRTDRTGVVAAE-------GKEAHKKPSSSSTKLPSKLELQMGRK 314



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.129    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,741,435
Number of extensions: 302600
Number of successful extensions: 647
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 644
Number of HSP's successfully gapped: 2
Length of query: 342
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 240
Effective length of database: 11,709,973
Effective search space: 2810393520
Effective search space used: 2810393520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 156 (64.7 bits)