BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0409400 Os03g0409400|Os03g0409400
         (194 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0409400  Similar to Mps one binder kinase activator-lik...   371   e-103
Os10g0396300  Similar to MOB1                                     321   2e-88
Os03g0577200  Similar to Mps one binder kinase activator-lik...   308   1e-84
Os08g0163200                                                       96   1e-20

>Os03g0409400 Similar to Mps one binder kinase activator-like 1B (Mob1 homolog
           1B) (Mob1 alpha) (Mob1A) (Protein Mob4B). Splice isoform
           2
          Length = 194

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/194 (91%), Positives = 178/194 (91%)

Query: 1   MSLFGRSSRSQLTFRXXXXXXXXXXXXXXXXHIDATLGSGNLREAVRLPIGEDLNEWLAV 60
           MSLFGRSSRSQLTFR                HIDATLGSGNLREAVRLPIGEDLNEWLAV
Sbjct: 1   MSLFGRSSRSQLTFRPKKSSPSGSKGLPLKKHIDATLGSGNLREAVRLPIGEDLNEWLAV 60

Query: 61  NTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRWADGMKVKKPVQVSAPKYVEYLM 120
           NTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRWADGMKVKKPVQVSAPKYVEYLM
Sbjct: 61  NTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRWADGMKVKKPVQVSAPKYVEYLM 120

Query: 121 DWVESQLDDEAIFPQKIGAPFPQNFREVIRTIFKRLFRVYSHMYHSHFQMILKLKEEAHL 180
           DWVESQLDDEAIFPQKIGAPFPQNFREVIRTIFKRLFRVYSHMYHSHFQMILKLKEEAHL
Sbjct: 121 DWVESQLDDEAIFPQKIGAPFPQNFREVIRTIFKRLFRVYSHMYHSHFQMILKLKEEAHL 180

Query: 181 STCFKHFVLFTWRS 194
           STCFKHFVLFTWRS
Sbjct: 181 STCFKHFVLFTWRS 194



>Os10g0396300 Similar to MOB1
          Length = 216

 Score =  321 bits (822), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 144/193 (74%), Positives = 164/193 (84%)

Query: 1   MSLFGRSSRSQLTFRXXXXXXXXXXXXXXXXHIDATLGSGNLREAVRLPIGEDLNEWLAV 60
           MSLFG  S++Q TFR                HIDATLGSGNLR+AVRLP GEDLNEWLAV
Sbjct: 1   MSLFGLGSKNQKTFRPKKNAPSGNKGVQLKKHIDATLGSGNLRDAVRLPPGEDLNEWLAV 60

Query: 61  NTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRWADGMKVKKPVQVSAPKYVEYLM 120
           NTVDFFNQVN LYGTLMEFCT +TCP MSAGPK+EYRWADG+++KKP++VSAPKYVEYLM
Sbjct: 61  NTVDFFNQVNILYGTLMEFCTPTTCPTMSAGPKFEYRWADGIQIKKPIEVSAPKYVEYLM 120

Query: 121 DWVESQLDDEAIFPQKIGAPFPQNFREVIRTIFKRLFRVYSHMYHSHFQMILKLKEEAHL 180
           DW+E QLDDE+IFPQK+G PFPQNFREV++TIFKRLFRVY+H+YH+HFQ I+ LKEEAHL
Sbjct: 121 DWIEVQLDDESIFPQKLGTPFPQNFREVVKTIFKRLFRVYAHIYHTHFQKIVSLKEEAHL 180

Query: 181 STCFKHFVLFTWR 193
           +TCFKHF LFTW 
Sbjct: 181 NTCFKHFTLFTWE 193



>Os03g0577200 Similar to Mps one binder kinase activator-like 1A (Mob1 homolog
           1A) (Mob1A) (Mob1B) (Protein Mob4A)
          Length = 214

 Score =  308 bits (790), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 140/191 (73%), Positives = 160/191 (83%), Gaps = 1/191 (0%)

Query: 1   MSLFGRSSRSQLTFRXXXXXXXXXXXXXXXXHIDATLGSGNLREAVRLPIGEDLNEWLAV 60
           MSLFG   R+Q TFR                HIDATLGSGNLREAVRLP GED+NEWLAV
Sbjct: 1   MSLFGLG-RNQKTFRPKKSAPSGSKGAQLRKHIDATLGSGNLREAVRLPPGEDINEWLAV 59

Query: 61  NTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRWADGMKVKKPVQVSAPKYVEYLM 120
           NTVDFFNQVN LYGTL EFCT  +CP M+AGPKYEYRWADG+++KKP++VSAPKYVEYLM
Sbjct: 60  NTVDFFNQVNLLYGTLAEFCTPESCPTMTAGPKYEYRWADGVQIKKPIEVSAPKYVEYLM 119

Query: 121 DWVESQLDDEAIFPQKIGAPFPQNFREVIRTIFKRLFRVYSHMYHSHFQMILKLKEEAHL 180
           DW+E QLDDE+IFPQK+G PFP NF+EV++TIFKRLFRVY+H+YHSHFQ I+ LKEEAHL
Sbjct: 120 DWIEGQLDDESIFPQKLGTPFPPNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHL 179

Query: 181 STCFKHFVLFT 191
           +TCFKHF+LFT
Sbjct: 180 NTCFKHFILFT 190



>Os08g0163200 
          Length = 110

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 41/54 (75%), Positives = 49/54 (90%)

Query: 138 GAPFPQNFREVIRTIFKRLFRVYSHMYHSHFQMILKLKEEAHLSTCFKHFVLFT 191
           G PFP NF+EV++TIFKRLFRVY+H+YHS FQ I+ LKEEAHL+TCFKHF+LFT
Sbjct: 33  GTPFPPNFKEVVKTIFKRLFRVYAHIYHSSFQKIVSLKEEAHLNTCFKHFILFT 86



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.326    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,781,749
Number of extensions: 208990
Number of successful extensions: 453
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 451
Number of HSP's successfully gapped: 4
Length of query: 194
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 99
Effective length of database: 12,075,471
Effective search space: 1195471629
Effective search space used: 1195471629
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 153 (63.5 bits)