Os10g0396300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MOB1.
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Os10g0396300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MOB1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 199.46 | 0.664 | 8.73 | -3.03 | 3 | -2.39 | 2.43 | 3.55 | 0.102 | 21.6 | 25.1 | 10 | -- | -- |
| 203.62 | 0.67 | 8.77 | -3.44 | 3 | -2.13 | 2.2 | -- | 0.0249 | 21.6 | 24.7 | 7 | -- | -- |
| 220.17 | 0.696 | 8.76 | -3.31 | 2.99 | -2.31 | -- | 1.93 | 0.0418 | 21.6 | 25.1 | 10 | -- | -- |
| 221.61 | 0.698 | 8.77 | -3.52 | 2.99 | -2.12 | -- | -- | 0.0208 | 21.6 | 24.7 | 7 | -- | -- |
| 724.72 | 1.26 | 8.61 | -3 | -- | -3.1 | -- | 2.06 | 0.315 | -- | 23.2 | 6 | -- | -- |
| 269.74 | 0.77 | 8.81 | -3.75 | 3.27 | -- | 2.15 | -- | -0.168 | 22.5 | -- | -- | -- | -- |
| 288.78 | 0.796 | 8.82 | -3.84 | 3.25 | -- | -- | -- | -0.175 | 22.5 | -- | -- | -- | -- |
| 726.56 | 1.26 | 8.64 | -3.26 | -- | -2.97 | -- | -- | 0.258 | -- | 22.66 | 5 | -- | -- |
| 522.41 | 1.06 | 8.63 | -- | 2.93 | -3.04 | -- | -- | 0.643 | 21 | 23.06 | 11 | -- | -- |
| 938.84 | 1.43 | 8.73 | -3.78 | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
| 676.73 | 1.22 | 8.72 | -- | 3.23 | -- | -- | -- | 0.253 | 22.4 | -- | -- | -- | -- |
| 990.3 | 1.47 | 8.52 | -- | -- | -3.6 | -- | -- | 0.752 | -- | 21.32 | 2 | -- | -- |
| 1315.5 | 1.69 | 8.64 | -- | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.41 | temperature | 25 | 10 | > th | dose dependent | sin | 1 | NA |
| 6 | 193.19 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 7 | 193.34 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 8 | 193.42 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 25 | 195.56 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 27 | 195.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 52 | 197.98 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 64 | 198.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 72 | 199.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 75 | 199.22 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 82 | 199.57 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 84 | 199.61 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 98 | 200.27 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 128 | 201.27 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 133 | 201.53 | temperature | 25 | 270 | > th | dose dependent | sin | 6 | NA |
| 204 | 203.50 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 229 | 203.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 246 | 204.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 250 | 204.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 382 | 206.11 | temperature | 20 | 14400 | > th | dose dependent | sin | 7 | NA |
| 387 | 206.19 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 398 | 206.25 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 445 | 206.56 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 20 |
| 472 | 206.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 474 | 206.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 478 | 206.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 500 | 206.77 | temperature | 30 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 503 | 206.78 | temperature | 30 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 512 | 206.80 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 522 | 206.82 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 606 | 206.98 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 644 | 207.06 | temperature | 30 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 721 | 207.17 | temperature | 30 | 14400 | < th | dose dependent | sin | 6 | NA |
| 817 | 207.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |