BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0294200 Os03g0294200|AK069285
(653 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0294200 Similar to Fructose-6-phosphate-2-kinase/fruct... 1320 0.0
Os05g0164100 Similar to Fructose-6-phosphate 2-kinase/fruct... 780 0.0
AK106106 155 6e-38
>Os03g0294200 Similar to Fructose-6-phosphate-2-kinase/fructose-2,
6-bisphosphatase
Length = 653
Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/653 (97%), Positives = 637/653 (97%)
Query: 1 MXXXXRSSGGMSDQLFVSIKLECPRLAEMGLVPHVFGSHPVAGAWDPSKALLMEQEEAAL 60
M RSSGGMSDQLFVSIKLECPRLAEMGLVPHVFGSHPVAGAWDPSKALLMEQEEAAL
Sbjct: 1 MAAAARSSGGMSDQLFVSIKLECPRLAEMGLVPHVFGSHPVAGAWDPSKALLMEQEEAAL 60
Query: 61 WGLSCIVPSHRETLDFKFLLKPKDNSSHCIVEEGPDRSLVCGSNEVEIRNALFKFNDETG 120
WGLSCIVPSHRETLDFKFLLKPKDNSSHCIVEEGPDRSLVCGSNEVEIRNALFKFNDETG
Sbjct: 61 WGLSCIVPSHRETLDFKFLLKPKDNSSHCIVEEGPDRSLVCGSNEVEIRNALFKFNDETG 120
Query: 121 VVECKIFVETEILSPFDLAASWKAHQEHLQPRVRGAHDVIMNADSESRAKGADGRHVPPQ 180
VVECKIFVETEILSPFDLAASWKAHQEHLQPRVRGAHDVIMNADSESRAKGADGRHVPPQ
Sbjct: 121 VVECKIFVETEILSPFDLAASWKAHQEHLQPRVRGAHDVIMNADSESRAKGADGRHVPPQ 180
Query: 181 EEQRAIFVDRGVGSPEFARPTNETISMSNIKFDSEAKDMPXXXXXXXXXXXXDQMYGPKE 240
EEQRAIFVDRGVGSPEFARPTNETISMSNIKFDSEAKDMP DQMYGPKE
Sbjct: 181 EEQRAIFVDRGVGSPEFARPTNETISMSNIKFDSEAKDMPAAEGAVAAAAVADQMYGPKE 240
Query: 241 DRKLAIVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGINQTADFFRGDN 300
DRKLAIVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGINQTADFFRGDN
Sbjct: 241 DRKLAIVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGINQTADFFRGDN 300
Query: 301 KEGVEARNEVAALAMEDMLSWMQEGGQVGIFDATNSTRNRRNMLMKMAEGKCKIIFLETI 360
KEGVEARNEVAALAMEDMLSWMQEGGQVGIFDATNSTRNRRNMLMKMAEGKCKIIFLETI
Sbjct: 301 KEGVEARNEVAALAMEDMLSWMQEGGQVGIFDATNSTRNRRNMLMKMAEGKCKIIFLETI 360
Query: 361 CNDQNVLERNMRLKVQRSPDYAEQTDFEAGVRDFKERLAYYEKVYEPVEEGSYVKMIDMV 420
CNDQNVLERNMRLKVQRSPDYAEQTDFEAGVRDFKERLAYYEKVYEPVEEGSYVKMIDMV
Sbjct: 361 CNDQNVLERNMRLKVQRSPDYAEQTDFEAGVRDFKERLAYYEKVYEPVEEGSYVKMIDMV 420
Query: 421 SGTGGQLQINDISGYLPGRIVFFLVNCHLTPRPILLTRHGESLDNVRGRIGGDSSLSETG 480
SGTGGQLQINDISGYLPGRIVFFLVNCHLTPRPILLTRHGESLDNVRGRIGGDSSLSETG
Sbjct: 421 SGTGGQLQINDISGYLPGRIVFFLVNCHLTPRPILLTRHGESLDNVRGRIGGDSSLSETG 480
Query: 481 SLYSRKLASFIEKRLASERTASIWTSTLQRSILTAQPIIGFPKIQWRALDEINAGICDGM 540
SLYSRKLASFIEKRLASERTASIWTSTLQRSILTAQPIIGFPKIQWRALDEINAGICDGM
Sbjct: 481 SLYSRKLASFIEKRLASERTASIWTSTLQRSILTAQPIIGFPKIQWRALDEINAGICDGM 540
Query: 541 TYDEIKKIKPEEYESRSKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAV 600
TYDEIKKIKPEEYESRSKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAV
Sbjct: 541 TYDEIKKIKPEEYESRSKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAV 600
Query: 601 LRALYAYFADKPLEELPNIEIPLHTIIEIQMGVAGVQEKRYKLMDAVNSTAGI 653
LRALYAYFADKPLEELPNIEIPLHTIIEIQMGVAGVQEKRYKLMDAVNSTAGI
Sbjct: 601 LRALYAYFADKPLEELPNIEIPLHTIIEIQMGVAGVQEKRYKLMDAVNSTAGI 653
>Os05g0164100 Similar to Fructose-6-phosphate
2-kinase/fructose-2,6-bisphosphatase (EC 2.7.1.105) (EC
3.1.3.46) (Fragment)
Length = 773
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/466 (78%), Positives = 411/466 (88%)
Query: 180 QEEQRAIFVDRGVGSPEFARPTNETISMSNIKFDSEAKDMPXXXXXXXXXXXXDQMYGPK 239
Q+ Q+ +FVDRGVGS +F + ++ S + F + + MP D+++G K
Sbjct: 308 QDGQKGLFVDRGVGSTKFGKSSSACSLASGLNFGTGKQAMPEAAGAVAAAAVADRLHGSK 367
Query: 240 EDRKLAIVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGINQTADFFRGD 299
EDRKLAIVLVGLPARGKTFTAAKLTRYLRWLGHET+HFNVGKYRRLKHG NQ+ADFFR D
Sbjct: 368 EDRKLAIVLVGLPARGKTFTAAKLTRYLRWLGHETRHFNVGKYRRLKHGANQSADFFRDD 427
Query: 300 NKEGVEARNEVAALAMEDMLSWMQEGGQVGIFDATNSTRNRRNMLMKMAEGKCKIIFLET 359
N EG+EARNEVAALAMEDM+ WM GGQVGIFDATNSTR RR MLMKMAEG CKIIFLET
Sbjct: 428 NPEGIEARNEVAALAMEDMIDWMHGGGQVGIFDATNSTRKRRYMLMKMAEGNCKIIFLET 487
Query: 360 ICNDQNVLERNMRLKVQRSPDYAEQTDFEAGVRDFKERLAYYEKVYEPVEEGSYVKMIDM 419
ICND N++ERN+RLK+Q+SPDYA+Q D+E GVRDFKERLA YEKVYEPV+EGSY+KMIDM
Sbjct: 488 ICNDPNIIERNVRLKIQQSPDYADQPDYETGVRDFKERLANYEKVYEPVQEGSYIKMIDM 547
Query: 420 VSGTGGQLQINDISGYLPGRIVFFLVNCHLTPRPILLTRHGESLDNVRGRIGGDSSLSET 479
V G GGQLQ+N+ISGYLPGRIVFFLVN HLTPRPILLTRHGESL NVRGR+GGD+ LSE
Sbjct: 548 VKGQGGQLQVNNISGYLPGRIVFFLVNSHLTPRPILLTRHGESLHNVRGRVGGDTVLSED 607
Query: 480 GSLYSRKLASFIEKRLASERTASIWTSTLQRSILTAQPIIGFPKIQWRALDEINAGICDG 539
G LYS+KLA+FIEKRL SE+TASIWTSTLQR+ILTA PI+GFPKIQWRALDEIN+G+CDG
Sbjct: 608 GELYSKKLANFIEKRLKSEKTASIWTSTLQRTILTASPIVGFPKIQWRALDEINSGVCDG 667
Query: 540 MTYDEIKKIKPEEYESRSKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQA 599
MTY+EIKK+ PEE+ESR KDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQA
Sbjct: 668 MTYEEIKKVMPEEFESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQA 727
Query: 600 VLRALYAYFADKPLEELPNIEIPLHTIIEIQMGVAGVQEKRYKLMD 645
VLRALYAYFAD+PL E+P+IE+PLHTIIEIQMGV GV+EKRYKLMD
Sbjct: 728 VLRALYAYFADRPLREVPDIEMPLHTIIEIQMGVTGVEEKRYKLMD 773
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 107/150 (71%), Gaps = 2/150 (1%)
Query: 14 QLFVSIKLECPRLAEMGLVPHVFGSHPVAGAWDPSKALLMEQEEAALWGLSCIVPSHRET 73
QL+VS+K+E R+ LVPHV+GS P+ G+WDP++AL ME+E A++W LS +VP ET
Sbjct: 47 QLYVSLKMENARITG-DLVPHVYGSEPIIGSWDPARALAMERELASMWALSFVVPPDHET 105
Query: 74 LDFKFLLKPKDNSSHCIVEEGPDRSLVCGSNEVEIRNALFKFNDETGVVECKIFVETEIL 133
LDFKFLLKPKD + CI+EEGP R L G E ++R A FK N + +E ++F + +I+
Sbjct: 106 LDFKFLLKPKDADTPCIIEEGPTRHLTGGMLEGDVRIAWFKMNGDHETLEFRVFNKADIV 165
Query: 134 SPFDLAASWKAHQEHLQP-RVRGAHDVIMN 162
SP DLAASW+ +E+ QP +VRG DV +N
Sbjct: 166 SPLDLAASWRVFKENFQPSKVRGIPDVSIN 195
>AK106106
Length = 567
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 206/409 (50%), Gaps = 38/409 (9%)
Query: 246 IVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGINQTADFFRGDNKEGVE 305
VLVGLPARGK++ + ++TRY RW G + F+ RR G F R E
Sbjct: 151 FVLVGLPARGKSYVSRRITRYWRWRGVPCQTFHYAATRRRLFG-----PFDRTKESRTEE 205
Query: 306 ARNEVAALAMEDMLSWMQEGGQVGIFDATNSTRNRRNMLMKM--AEG--KCKIIFLETIC 361
+ A+A E + + E G + + D TN+T RR +L+ M EG ++IF+E +
Sbjct: 206 LESTSRAIAAE-AVKFANEAGGIAVIDGTNTTSQRRKLLLDMLVEEGMATSRVIFIEIVR 264
Query: 362 NDQNVLERNMRLK---------VQRSPDYAEQ--TDFEAGVRDFKERLAYYEKVYEPVEE 410
+D +++ N+ ++ SP+ + ++ + ++ ++ +V++P +
Sbjct: 265 DDPGIIQANVARSYEAKVASGALENSPEARARYIDEYNSVIKQYERHATSLCEVHDP--D 322
Query: 411 GSYVKMIDMVSGTGGQLQINDISGYLPGRIVFFLVNCHLTPRPILLTRHGESLDNVRGRI 470
S++++ + T ++ I G + R+V L N P + LTR GE D V GR+
Sbjct: 323 MSFIRIKNHFHVT-----LHRIEGVIATRLVSLLHNMWFEPHVLYLTRCGEWDDLVEGRL 377
Query: 471 GGDSSLSETGSLYSRKLASFI--EKRLASERTASIWTSTLQ-RSILTAQPIIGFPKIQWR 527
GG+S L+ G ++ LA++I E++ ++ T + S+ Q R+ T + G P + R
Sbjct: 378 GGNSKLTANGEAFATALANYIESERKKRNDSTPLLVMSSAQLRARQTCAKLAGLPNVAIR 437
Query: 528 ---ALDEINAGICDGMTYDEIKKIKPEEYESRSKDKLRYRYPRGESYLDVIQ-RLEPVII 583
LD++N G CDG T +E+ P + + + +P GES + + RLE I+
Sbjct: 438 YLPTLDDLNYGDCDGQTLNEVMLTLPNTLRTLLEHPYKNAWPNGESIEQLFESRLEQHIL 497
Query: 584 ELERQRAPVVVISHQAVLRALYAYF---ADKPLEELPNIEIPLHTIIEI 629
EL+ V+V++H+ +++ L +F D+ EE I+IPLH + ++
Sbjct: 498 ELQATDRDVLVVAHEHIIQGLRLFFDDSLDQNPEEALKIKIPLHHVFKL 546
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,050,563
Number of extensions: 941748
Number of successful extensions: 1884
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1880
Number of HSP's successfully gapped: 4
Length of query: 653
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 546
Effective length of database: 11,448,903
Effective search space: 6251101038
Effective search space used: 6251101038
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)