Os05g0164100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (EC 2.7.1.105) (EC 3.1.3.46) (Fragment).
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Os05g0164100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (EC 2.7.1.105) (EC 3.1.3.46) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.66 | 0.307 | 13.4 | 0.51 | 1.22 | -0.96 | -0.182 | 3.67 | 0.0129 | 0.991 | 26.4 | 1634 | -- | -- |
| 45.9 | 0.316 | 13.5 | -0.233 | 1.24 | -0.555 | -0.132 | -- | -0.00517 | 1.16 | 22.06 | 7585 | -- | -- |
| 42.8 | 0.305 | 13.4 | 0.518 | 1.22 | -0.97 | -- | 3.71 | 0.0118 | 0.985 | 26.44 | 1644 | -- | -- |
| 45.99 | 0.316 | 13.5 | -0.238 | 1.25 | -0.567 | -- | -- | 0.0031 | 1.12 | 22.2 | 7597 | -- | -- |
| 99.62 | 0.467 | 13.4 | 0.107 | -- | -1.84 | -- | 4.36 | -0.0538 | -- | 26.44 | 1644 | -- | -- |
| 57.19 | 0.355 | 13.5 | -0.513 | 1.23 | -- | -0.226 | -- | -0.193 | 1.15 | -- | -- | -- | -- |
| 57.4 | 0.355 | 13.5 | -0.505 | 1.23 | -- | -- | -- | -0.192 | 1.16 | -- | -- | -- | -- |
| 91.91 | 0.448 | 13.4 | -0.175 | -- | -1.54 | -- | -- | 0.0639 | -- | 22.2 | 7597 | -- | -- |
| 46.44 | 0.317 | 13.5 | -- | 1.25 | -0.816 | -- | -- | 0.0656 | 1.13 | 15.79 | 7624 | -- | -- |
| 150.89 | 0.574 | 13.5 | -0.458 | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
| 64.13 | 0.375 | 13.5 | -- | 1.22 | -- | -- | -- | -0.136 | 1.14 | -- | -- | -- | -- |
| 92.35 | 0.449 | 13.4 | -- | -- | -1.92 | -- | -- | 0.115 | -- | 15.79 | 7624 | -- | -- |
| 156.43 | 0.584 | 13.5 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.54 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 2 | 42.56 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 4 | 42.58 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 12 | 43.16 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 22 | 43.20 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 24 | 43.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 51 | 43.40 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 62 | 43.44 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 65 | 43.44 | wind | 9 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 75 | 43.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 102 | 43.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 141 | 43.63 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 161 | 43.65 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 166 | 43.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 173 | 43.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 191 | 43.70 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 199 | 43.71 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 206 | 43.72 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 208 | 43.73 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 217 | 43.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 219 | 43.75 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 230 | 43.77 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 274 | 43.86 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 279 | 43.87 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 280 | 43.87 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 295 | 43.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 302 | 43.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 321 | 43.93 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 322 | 43.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 362 | 43.99 | radiation | 20 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 414 | 44.03 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 418 | 44.04 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 15 |
| 421 | 44.05 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 427 | 44.05 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 465 | 44.08 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 22 |
| 469 | 44.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 474 | 44.10 | wind | 7 | 43200 | < th | dose independent | sin | 1 | NA |
| 475 | 44.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 485 | 44.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 493 | 44.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 513 | 44.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 538 | 44.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 556 | 44.19 | wind | 7 | 43200 | > th | dose independent | sin | 1 | NA |
| 569 | 44.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 578 | 44.21 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 594 | 44.22 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 612 | 44.23 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 617 | 44.23 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 621 | 44.23 | radiation | 20 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 628 | 44.24 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 629 | 44.24 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 630 | 44.24 | radiation | 20 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 634 | 44.24 | radiation | 20 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 640 | 44.24 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 663 | 44.26 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 736 | 44.32 | temperature | 30 | 1440 | < th | dose independent | sin | 4 | NA |
| 792 | 44.36 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 794 | 44.36 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 801 | 44.37 | temperature | 30 | 1440 | > th | dose independent | sin | 5 | NA |
| 849 | 44.41 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 1 |