BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0245100 Os03g0245100|AK069529
         (324 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0245100  Dihydrodipicolinate reductase family protein        669   0.0  
Os02g0436400  Dihydrodipicolinate reductase family protein        437   e-123

>Os03g0245100 Dihydrodipicolinate reductase family protein
          Length = 324

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/324 (100%), Positives = 324/324 (100%)

Query: 1   LSLRPPCTLSPAPWRRRRTLHGAAGTPQRVSVAAPSAIVEAVSPPARFSFPILVNGCTGK 60
           LSLRPPCTLSPAPWRRRRTLHGAAGTPQRVSVAAPSAIVEAVSPPARFSFPILVNGCTGK
Sbjct: 1   LSLRPPCTLSPAPWRRRRTLHGAAGTPQRVSVAAPSAIVEAVSPPARFSFPILVNGCTGK 60

Query: 61  MGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVRIYGPSAREDVLSSVIDEFPDV 120
           MGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVRIYGPSAREDVLSSVIDEFPDV
Sbjct: 61  MGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVRIYGPSAREDVLSSVIDEFPDV 120

Query: 121 VVVDYTAPDSVNANAELYCKLGLPFVMGTTGGDRQLLYKSVQDSNNYALISPQMGKQVVA 180
           VVVDYTAPDSVNANAELYCKLGLPFVMGTTGGDRQLLYKSVQDSNNYALISPQMGKQVVA
Sbjct: 121 VVVDYTAPDSVNANAELYCKLGLPFVMGTTGGDRQLLYKSVQDSNNYALISPQMGKQVVA 180

Query: 181 FLAAMEIMAEQFPGAFSGYHLEVLESHQAGKLDISGTAKAVIACFEKLGVSYDMNRMVKI 240
           FLAAMEIMAEQFPGAFSGYHLEVLESHQAGKLDISGTAKAVIACFEKLGVSYDMNRMVKI
Sbjct: 181 FLAAMEIMAEQFPGAFSGYHLEVLESHQAGKLDISGTAKAVIACFEKLGVSYDMNRMVKI 240

Query: 241 RDPEQQLEMVGVPEEHIEGHAFHLYHLTSPDDSVSFEFQHNVCGRSIYAEGSVDAAMFLH 300
           RDPEQQLEMVGVPEEHIEGHAFHLYHLTSPDDSVSFEFQHNVCGRSIYAEGSVDAAMFLH
Sbjct: 241 RDPEQQLEMVGVPEEHIEGHAFHLYHLTSPDDSVSFEFQHNVCGRSIYAEGSVDAAMFLH 300

Query: 301 RKVRSNDSKRIYDMIDVLREGSMR 324
           RKVRSNDSKRIYDMIDVLREGSMR
Sbjct: 301 RKVRSNDSKRIYDMIDVLREGSMR 324



>Os02g0436400 Dihydrodipicolinate reductase family protein
          Length = 343

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 200/291 (68%), Positives = 250/291 (85%)

Query: 34  APSAIVEAVSPPARFSFPILVNGCTGKMGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRV 93
           A  ++  A + P + SFPILVN CTGKMG +VAEA  S+GL LVP+SFS+ +  D  V +
Sbjct: 53  ASQSLESAPAAPPKHSFPILVNSCTGKMGKAVAEAAVSAGLQLVPVSFSAIEVPDGKVEI 112

Query: 94  GHTDVRIYGPSAREDVLSSVIDEFPDVVVVDYTAPDSVNANAELYCKLGLPFVMGTTGGD 153
              ++ I  PS  E +L S+  ++PD++VVDYT PD+VNANAELYCKLGLPFVMGTTGG+
Sbjct: 113 CDREIYIRDPSEGESILPSIAKDYPDMIVVDYTVPDAVNANAELYCKLGLPFVMGTTGGN 172

Query: 154 RQLLYKSVQDSNNYALISPQMGKQVVAFLAAMEIMAEQFPGAFSGYHLEVLESHQAGKLD 213
           RQLL+K+V+D+N YA+ISPQMGKQVVAFLAAMEIMAEQFPGAFSGY LEV+ESHQA KLD
Sbjct: 173 RQLLHKTVEDANVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYKLEVMESHQATKLD 232

Query: 214 ISGTAKAVIACFEKLGVSYDMNRMVKIRDPEQQLEMVGVPEEHIEGHAFHLYHLTSPDDS 273
           ISGTAKAVI+CF+KLGVS+++N + ++RDP++QL +VGVPEEH+ GHAFH+YHLTSPD++
Sbjct: 233 ISGTAKAVISCFQKLGVSFNLNEVKQVRDPQEQLTLVGVPEEHLSGHAFHMYHLTSPDET 292

Query: 274 VSFEFQHNVCGRSIYAEGSVDAAMFLHRKVRSNDSKRIYDMIDVLREGSMR 324
           VSFEFQHNVCGRSIYAEG+VDAA+FLH+K++S  +K++YDMIDVLREG+MR
Sbjct: 293 VSFEFQHNVCGRSIYAEGTVDAALFLHKKIQSGANKKLYDMIDVLREGNMR 343



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,229,645
Number of extensions: 469078
Number of successful extensions: 1392
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1392
Number of HSP's successfully gapped: 2
Length of query: 324
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 223
Effective length of database: 11,762,187
Effective search space: 2622967701
Effective search space used: 2622967701
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)