BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0223700 Os03g0223700|AK068416
         (711 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0223700  Armadillo-like helical domain containing protein   1400   0.0  

>Os03g0223700 Armadillo-like helical domain containing protein
          Length = 711

 Score = 1400 bits (3623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/711 (96%), Positives = 687/711 (96%)

Query: 1   MAADALSIIPGAVLRNLSDKLYEKRKNAALEIEGIVKQLATSGEHDKISAVIALLTNDFT 60
           MAADALSIIPGAVLRNLSDKLYEKRKNAALEIEGIVKQLATSGEHDKISAVIALLTNDFT
Sbjct: 1   MAADALSIIPGAVLRNLSDKLYEKRKNAALEIEGIVKQLATSGEHDKISAVIALLTNDFT 60

Query: 61  MSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVLTSFLDQDSRVRYYACEALYNIA 120
           MSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVLTSFLDQDSRVRYYACEALYNIA
Sbjct: 61  MSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVLTSFLDQDSRVRYYACEALYNIA 120

Query: 121 KVVRGDFIIYFNKIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLR 180
           KVVRGDFIIYFNKIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLR
Sbjct: 121 KVVRGDFIIYFNKIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLR 180

Query: 181 ERMNVLNPYVRQFLVGWITVLDSVPDIDMXXXXXXXXXXXXNMLSDSSHEIRQQADAALS 240
           ERMNVLNPYVRQFLVGWITVLDSVPDIDM            NMLSDSSHEIRQQADAALS
Sbjct: 181 ERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADAALS 240

Query: 241 EFLQEIKNSPNVDYGRMAEILVRRAGSSDEFTRLTSITWINEFVKLGGEQLVPYYADILG 300
           EFLQEIKNSPNVDYGRMAEILVRRAGSSDEFTRLTSITWINEFVKLGGEQLVPYYADILG
Sbjct: 241 EFLQEIKNSPNVDYGRMAEILVRRAGSSDEFTRLTSITWINEFVKLGGEQLVPYYADILG 300

Query: 301 AILPCISDQEEKIRVVARETNEELCAIKADPTEGFDIGAILSIAKRELNSEHEATRIESL 360
           AILPCISDQEEKIRVVARETNEELCAIKADPTEGFDIGAILSIAKRELNSEHEATRIESL
Sbjct: 301 AILPCISDQEEKIRVVARETNEELCAIKADPTEGFDIGAILSIAKRELNSEHEATRIESL 360

Query: 361 HWFSTLLVRYRAEFLAYLNDIFDPLLNALSDPSDAVVLLVLEVHARIAEESHHFHHLVSY 420
           HWFSTLLVRYRAEFLAYLNDIFDPLLNALSDPSDAVVLLVLEVHARIAEESHHFHHLVSY
Sbjct: 361 HWFSTLLVRYRAEFLAYLNDIFDPLLNALSDPSDAVVLLVLEVHARIAEESHHFHHLVSY 420

Query: 421 LIHTFHNNHVLLEKRGALIVRRLCILLGAEKVYREFSTILETEGDLEFASTMVQALNLIL 480
           LIHTFHNNHVLLEKRGALIVRRLCILLGAEKVYREFSTILETEGDLEFASTMVQALNLIL
Sbjct: 421 LIHTFHNNHVLLEKRGALIVRRLCILLGAEKVYREFSTILETEGDLEFASTMVQALNLIL 480

Query: 481 LTSTELAELRSLLKKTLVDSCGKDLFQSLYASWCHSPMATISLCLLAQAYNHAISVIQSL 540
           LTSTELAELRSLLKKTLVDSCGKDLFQSLYASWCHSPMATISLCLLAQAYNHAISVIQSL
Sbjct: 481 LTSTELAELRSLLKKTLVDSCGKDLFQSLYASWCHSPMATISLCLLAQAYNHAISVIQSL 540

Query: 541 GEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGKHTWXXXXXXXXXXXXPQQSAAFK 600
           GEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGKHTW            PQQSAAFK
Sbjct: 541 GEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGKHTWLLKTLYGLLMLLPQQSAAFK 600

Query: 601 ILRTRLKTVPFSENLKRTSSTNPYSQILQVTEDGNRNHDTQSYNAINFPSRLHQFESMQQ 660
           ILRTRLKTVPFSENLKRTSSTNPYSQILQVTEDGNRNHDTQSYNAINFPSRLHQFESMQQ
Sbjct: 601 ILRTRLKTVPFSENLKRTSSTNPYSQILQVTEDGNRNHDTQSYNAINFPSRLHQFESMQQ 660

Query: 661 QHRVHLKNQLQSQKSASAIVLSQEIQRYEEAHSSSTSEIGRPPSRTSRGIS 711
           QHRVHLKNQLQSQKSASAIVLSQEIQRYEEAHSSSTSEIGRPPSRTSRGIS
Sbjct: 661 QHRVHLKNQLQSQKSASAIVLSQEIQRYEEAHSSSTSEIGRPPSRTSRGIS 711



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.134    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,163,982
Number of extensions: 741086
Number of successful extensions: 1882
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1876
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 603
Effective length of database: 11,396,689
Effective search space: 6872203467
Effective search space used: 6872203467
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)