BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0814900 Os02g0814900|Os02g0814900
         (315 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0814900  Probable nicotinate-nucleotide adenylyltransfe...   598   e-171

>Os02g0814900 Probable nicotinate-nucleotide adenylyltransferase family protein
          Length = 315

 Score =  598 bits (1542), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/315 (93%), Positives = 296/315 (93%)

Query: 1   MKRRARSFLFRPIAGGAAPAKLGGVLXXXXXXXNTERISGSEGRTSLGRSRNFVAVENLR 60
           MKRRARSFLFRPIAGGAAPAKLGGVL       NTERISGSEGRTSLGRSRNFVAVENLR
Sbjct: 1   MKRRARSFLFRPIAGGAAPAKLGGVLRRPRRPRNTERISGSEGRTSLGRSRNFVAVENLR 60

Query: 61  RYWRAAMXXXXXXXXXXXXAVDPGREGGKRGVAVLVATGSFNPPTYMHLRMFELAKDELQ 120
           RYWRAAM            AVDPGREGGKRGVAVLVATGSFNPPTYMHLRMFELAKDELQ
Sbjct: 61  RYWRAAMEELELPLPTEKLAVDPGREGGKRGVAVLVATGSFNPPTYMHLRMFELAKDELQ 120

Query: 121 QRGYSVLGGYMSPVNDAYKKKGLLSAAHRIRLCELACESSSFVMVDRWEAMQKGFQRTLT 180
           QRGYSVLGGYMSPVNDAYKKKGLLSAAHRIRLCELACESSSFVMVDRWEAMQKGFQRTLT
Sbjct: 121 QRGYSVLGGYMSPVNDAYKKKGLLSAAHRIRLCELACESSSFVMVDRWEAMQKGFQRTLT 180

Query: 181 VLSRIRNALSKDGLADGGSPNVMLLCGSDLLESFSTPGVWIPDQVRIICKDFGVICIRRE 240
           VLSRIRNALSKDGLADGGSPNVMLLCGSDLLESFSTPGVWIPDQVRIICKDFGVICIRRE
Sbjct: 181 VLSRIRNALSKDGLADGGSPNVMLLCGSDLLESFSTPGVWIPDQVRIICKDFGVICIRRE 240

Query: 241 GKDVEKIISSSEILNECRDNIISVDEIVPNQISSSRVRECIKKCLSIKYLVCDEVIQYIG 300
           GKDVEKIISSSEILNECRDNIISVDEIVPNQISSSRVRECIKKCLSIKYLVCDEVIQYIG
Sbjct: 241 GKDVEKIISSSEILNECRDNIISVDEIVPNQISSSRVRECIKKCLSIKYLVCDEVIQYIG 300

Query: 301 EHKLYKEADGSDTRK 315
           EHKLYKEADGSDTRK
Sbjct: 301 EHKLYKEADGSDTRK 315



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.137    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,630,048
Number of extensions: 414722
Number of successful extensions: 786
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 786
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 214
Effective length of database: 11,762,187
Effective search space: 2517108018
Effective search space used: 2517108018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)