BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0772300 Os02g0772300|AK071492
(256 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0772300 GCN5-related N-acetyltransferase domain contai... 520 e-148
Os05g0387800 GCN5-related N-acetyltransferase domain contai... 410 e-115
>Os02g0772300 GCN5-related N-acetyltransferase domain containing protein
Length = 256
Score = 520 bits (1338), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/256 (97%), Positives = 249/256 (97%)
Query: 1 MATAEKKRPRSRSXXXXXXXVEKRPSRKQILGRKKAVEELIRKAVAVKDHLAQFPDFHKY 60
MATAEKKRPRSRS VEKRPSRKQILGRKKAVEELIRKAVAVKDHLAQFPDFHKY
Sbjct: 1 MATAEKKRPRSRSGGGGGGGVEKRPSRKQILGRKKAVEELIRKAVAVKDHLAQFPDFHKY 60
Query: 61 QRNGLLVYLESGHGNQLPLSTRKYIQNLLKVNMEGQYGPEWPSEEKIKRREMVAPEARYI 120
QRNGLLVYLESGHGNQLPLSTRKYIQNLLKVNMEGQYGPEWPSEEKIKRREMVAPEARYI
Sbjct: 61 QRNGLLVYLESGHGNQLPLSTRKYIQNLLKVNMEGQYGPEWPSEEKIKRREMVAPEARYI 120
Query: 121 FVRQSSNAITTQNIMKQDSGLEFTHEACNEDRLIGFVHYRFVLEEDVPVVYVYELQMVPS 180
FVRQSSNAITTQNIMKQDSGLEFTHEACNEDRLIGFVHYRFVLEEDVPVVYVYELQMVPS
Sbjct: 121 FVRQSSNAITTQNIMKQDSGLEFTHEACNEDRLIGFVHYRFVLEEDVPVVYVYELQMVPS 180
Query: 181 AQGKGLGKFLMELIELIACKSQMGAVMLTVQKANNLAMAFYKKLSDCWLKHFNVTLILQI 240
AQGKGLGKFLMELIELIACKSQMGAVMLTVQKANNLAMAFYKKLSDCWLKHFNVTLILQI
Sbjct: 181 AQGKGLGKFLMELIELIACKSQMGAVMLTVQKANNLAMAFYKKLSDCWLKHFNVTLILQI 240
Query: 241 CNIQYFAITSRSTDWA 256
CNIQYFAITSRSTDWA
Sbjct: 241 CNIQYFAITSRSTDWA 256
>Os05g0387800 GCN5-related N-acetyltransferase domain containing protein
Length = 262
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/224 (90%), Positives = 208/224 (92%), Gaps = 3/224 (1%)
Query: 1 MATAEKKRPRSRSXXXXXXXVEKRPSRKQILGRKKAVEELIRKAVAVKDHLAQFPDFHKY 60
MATAEKKRPRS S V KR SRK+ILGRKKAV+ELIRKAVA+KDHLAQFPDFHKY
Sbjct: 1 MATAEKKRPRSSSSNGG---VGKRLSRKEILGRKKAVKELIRKAVAMKDHLAQFPDFHKY 57
Query: 61 QRNGLLVYLESGHGNQLPLSTRKYIQNLLKVNMEGQYGPEWPSEEKIKRREMVAPEARYI 120
Q NGLLVYLE G+GNQLPL TRKYIQNLLKVNMEGQYGPEWPSEEK+KRREMVAPEARYI
Sbjct: 58 QSNGLLVYLEYGYGNQLPLPTRKYIQNLLKVNMEGQYGPEWPSEEKVKRREMVAPEARYI 117
Query: 121 FVRQSSNAITTQNIMKQDSGLEFTHEACNEDRLIGFVHYRFVLEEDVPVVYVYELQMVPS 180
FVRQSSNAITTQNIMKQDS LEFTHEACNEDRLIGFVHYRFVLEEDVPVVYVYELQM S
Sbjct: 118 FVRQSSNAITTQNIMKQDSRLEFTHEACNEDRLIGFVHYRFVLEEDVPVVYVYELQMESS 177
Query: 181 AQGKGLGKFLMELIELIACKSQMGAVMLTVQKANNLAMAFYKKL 224
AQGKGLGKFLMEL+ELIACKSQMGAVMLTVQKANNLAMAFYKKL
Sbjct: 178 AQGKGLGKFLMELVELIACKSQMGAVMLTVQKANNLAMAFYKKL 221
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,676,926
Number of extensions: 291709
Number of successful extensions: 596
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 595
Number of HSP's successfully gapped: 2
Length of query: 256
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 157
Effective length of database: 11,866,615
Effective search space: 1863058555
Effective search space used: 1863058555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)