Os02g0772300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0772300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : GCN5-related N-acetyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.7 | 0.389 | 6.6 | -0.834 | 0.164 | 0.926 | -0.655 | -0.758 | -0.257 | 0.246 | 10.01 | 98 | -- | -- |
| 69.04 | 0.387 | 6.58 | -0.719 | 0.166 | 0.904 | -0.501 | -- | -0.225 | 23.8 | 8.28 | 98 | -- | -- |
| 70.09 | 0.39 | 6.59 | -0.707 | 0.172 | 0.896 | -- | -0.0862 | -0.224 | 23.3 | 8.299 | 91 | -- | -- |
| 70.09 | 0.39 | 6.58 | -0.696 | 0.173 | 0.895 | -- | -- | -0.222 | 23.2 | 8.182 | 90 | -- | -- |
| 71.18 | 0.393 | 6.59 | -0.759 | -- | 0.791 | -- | -0.516 | -0.228 | -- | 5.554 | 275 | -- | -- |
| 77.43 | 0.413 | 6.56 | -0.516 | 0.194 | -- | 0.589 | -- | -0.0988 | 16.5 | -- | -- | -- | -- |
| 77.96 | 0.413 | 6.56 | -0.512 | 0.22 | -- | -- | -- | -0.0958 | 17.9 | -- | -- | -- | -- |
| 71.36 | 0.393 | 6.58 | -0.678 | -- | 0.781 | -- | -- | -0.206 | -- | 8.915 | 263 | -- | -- |
| 81.46 | 0.423 | 6.56 | -- | 0.184 | 0.567 | -- | -- | -0.106 | 20.8 | 8.182 | 90 | -- | -- |
| 80.47 | 0.419 | 6.55 | -0.519 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 84.88 | 0.431 | 6.54 | -- | 0.228 | -- | -- | -- | -0.0387 | 17.8 | -- | -- | -- | -- |
| 82.65 | 0.423 | 6.55 | -- | -- | 0.558 | -- | -- | -0.105 | -- | 6.306 | 211 | -- | -- |
| 87.57 | 0.437 | 6.54 | -- | -- | -- | -- | -- | -0.0433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.56 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 22 |
| 2 | 66.72 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 16 | 67.74 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 38 | 68.43 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 42 | 68.54 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 52 | 68.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 55 | 68.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 56 | 68.71 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 18 |
| 57 | 68.72 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 59 | 68.76 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 97 | 69.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 154 | 69.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 158 | 69.29 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 236 | 69.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 245 | 69.59 | temperature | 15 | 10 | > th | dose dependent | sin | 20 | NA |
| 291 | 69.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 342 | 69.76 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 363 | 69.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 367 | 69.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 382 | 69.82 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 406 | 69.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 407 | 69.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 450 | 69.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 463 | 69.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 473 | 69.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 612 | 70.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 616 | 70.01 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 717 | 70.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 799 | 70.16 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 813 | 70.17 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 924 | 70.26 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 996 | 70.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |