BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0761700 Os02g0761700|AK068344
(370 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0761700 Peptidase M24 family protein 733 0.0
Os04g0610500 Peptidase M24A, methionine aminopeptidase, sub... 370 e-102
Os07g0510100 Similar to Methionine aminopeptidase-like protein 323 2e-88
Os10g0508400 Similar to Methionine aminopeptidase-like protein 272 3e-73
Os07g0434700 Peptidase M24 family protein 172 3e-43
>Os02g0761700 Peptidase M24 family protein
Length = 370
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/370 (95%), Positives = 354/370 (95%)
Query: 1 MATSSSPRLLSSFLGDXXXXXXXXXXXXXXXXGSRRAAYQATRTLCNLVDILFNRGQSDK 60
MATSSSPRLLSSFLGD GSRRAAYQATRTLCNLVDILFNRGQSDK
Sbjct: 1 MATSSSPRLLSSFLGDRLLSASARPLLRGAAPGSRRAAYQATRTLCNLVDILFNRGQSDK 60
Query: 61 PEDNPRRLRPGKVSPRLSVPKHIQRPPYVNARQRPGLHNGPEIHDERGIECMRASGKLAA 120
PEDNPRRLRPGKVSPRLSVPKHIQRPPYVNARQRPGLHNGPEIHDERGIECMRASGKLAA
Sbjct: 61 PEDNPRRLRPGKVSPRLSVPKHIQRPPYVNARQRPGLHNGPEIHDERGIECMRASGKLAA 120
Query: 121 QVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPD 180
QVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPD
Sbjct: 121 QVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPD 180
Query: 181 SRPLEDGDIINIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSATFLCGNVDD 240
SRPLEDGDIINIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSATFLCGNVDD
Sbjct: 181 SRPLEDGDIINIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSATFLCGNVDD 240
Query: 241 KAKKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAE 300
KAKKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAE
Sbjct: 241 KAKKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAE 300
Query: 301 PVVLHFRNNEWGRMTLNQTFTIEPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILIT 360
PVVLHFRNNEWGRMTLNQTFTIEPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILIT
Sbjct: 301 PVVLHFRNNEWGRMTLNQTFTIEPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILIT 360
Query: 361 EDGAEILTQC 370
EDGAEILTQC
Sbjct: 361 EDGAEILTQC 370
>Os04g0610500 Peptidase M24A, methionine aminopeptidase, subfamily 1 protein
Length = 340
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/300 (60%), Positives = 224/300 (74%), Gaps = 24/300 (8%)
Query: 71 GKVSPRLSVPKHIQRPPYVNARQRPGLHNGPEIHDERGIECMRASGKLAAQVLKFAGTLV 130
G VSP L VP HI +PPYV + + + ++HD+ I M+A+ +LAA+VL++AGTLV
Sbjct: 65 GTVSPPLPVPGHITQPPYVGKKDASEIASEIQMHDKVSIIHMKAACELAARVLEYAGTLV 124
Query: 131 EPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPDSRPLEDGDII 190
+P +TTDEIDKAVH+MI+D GAYPSPLGY GFPKSVCTSVNECICHGIPDSR L+DGDII
Sbjct: 125 KPSVTTDEIDKAVHKMIIDAGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRELQDGDII 184
Query: 191 NIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSATFLCGNVDDKAKKLVQVTR 250
NIDVTVYLN GYHGDTS TFLCG VD+ +K+LV+VT
Sbjct: 185 NIDVTVYLN------------------------GYHGDTSKTFLCGEVDEASKRLVKVTE 220
Query: 251 ECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAEPVVLHFRNNE 310
EC+ +AIS C G +K+IGR I +HA++ FGVV +FVGHGVG++FH+EP++ H RNN
Sbjct: 221 ECMLRAISACKHGTSLKKIGRRISEHAERHGFGVVDRFVGHGVGRIFHSEPMIYHQRNNM 280
Query: 311 WGRMTLNQTFTIEPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILITEDGAEILTQC 370
G+M QTFTIEP L++GS++ +W D WTAVT DGSL+AQFEHTILIT+ GAEILT+C
Sbjct: 281 PGQMVEGQTFTIEPALSMGSIDCDMWDDGWTAVTTDGSLAAQFEHTILITKTGAEILTKC 340
>Os07g0510100 Similar to Methionine aminopeptidase-like protein
Length = 357
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/340 (47%), Positives = 216/340 (63%), Gaps = 30/340 (8%)
Query: 34 SRRAAYQATRTLCNLVDILFNRGQSDKPEDNPRRLRP----GKVSPRLSVPKHIQRPPYV 89
SRR + + L + D L +S +P + RP GK+SP+L VP+HI RP YV
Sbjct: 43 SRR--FIVSNKLAWVEDELVEITESQEPSSASSKKRPPLRRGKISPQLPVPEHIPRPSYV 100
Query: 90 NARQRPGLHNGPEIHDERGIECMRASGKLAAQVLKFAGTLVEPGITTDEIDKAVHQMIVD 149
+ + L + +IH GI MRA+ KLAA+ L FAGTL++P +TT+EID+ VH MI++
Sbjct: 101 GSNRPQELSSVRQIHSAEGIAGMRAACKLAARALDFAGTLIKPSVTTNEIDREVHNMIIE 160
Query: 150 NGAYPSPLGYCGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNRVFLCISSLY 209
GAYPS LGY GFPKS+CTS+NEC+CHG+PDS L+ GDI+N+DV V+LN
Sbjct: 161 AGAYPSQLGYGGFPKSICTSLNECVCHGVPDSTQLQTGDIMNVDVNVFLN---------- 210
Query: 210 LHKCQSMTMVAGQLGYHGDTSATFLCGNVDDKAKKLVQVTRECLDKAISICAPGVEIKRI 269
GYHG S TF+CG VDD + ++ ECL+K I++C GV K+I
Sbjct: 211 --------------GYHGGASRTFVCGEVDDSIRHFLKAAEECLEKGITVCRDGVNYKKI 256
Query: 270 GRTIQDHADKFKFGVVRQFVGHGVGQVFHAEPVVLHFRNNEWGRMTLNQTFTIEPMLTVG 329
G+ I A + + VV +FVGHG+G ++H+EP++LH N+ GRM QTFTIEP+LT+
Sbjct: 257 GKKISKLAYFYGYYVVDRFVGHGIGPIWHSEPLILHHANDNSGRMVEGQTFTIEPILTME 316
Query: 330 SVNPVIWSDDWTAVTEDGSLSAQFEHTILITEDGAEILTQ 369
V W D WT VT DGS +AQF+HT+L+T GAEILT+
Sbjct: 317 KAETVTWEDGWTTVTADGSWAAQFKHTVLVTRTGAEILTK 356
>Os10g0508400 Similar to Methionine aminopeptidase-like protein
Length = 390
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 183/307 (59%), Gaps = 30/307 (9%)
Query: 68 LRPGKVSPRLSVPKHIQRPPYV---NARQRPG--LHNGPEIHDERGIECMRASGKLAAQV 122
LRP +S VP I++P + + P L EI IE MR + ++A +V
Sbjct: 93 LRPYPISKMCVVPDKIEKPDWALDGTPKIEPDSDLQKRVEIKTPEQIERMRETCRIAREV 152
Query: 123 LKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPDSR 182
L A +++PGITTDEID+ VH+ V G YPSPL Y FPKS CTSVNE ICHGIPD+R
Sbjct: 153 LDAAARIIKPGITTDEIDRVVHEETVARGGYPSPLNYHFFPKSCCTSVNEVICHGIPDAR 212
Query: 183 PLEDGDIINIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSATFLCGNVDDKA 242
LEDGDI+N+DVTVY G HGD + T+ GNVD+ +
Sbjct: 213 KLEDGDIVNVDVTVYYK------------------------GVHGDLNETYFVGNVDEAS 248
Query: 243 KKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAEPV 302
K+LV+ T ECLDKAI+I PGV + +G I HA VV+ + GHG+G++FH P
Sbjct: 249 KQLVRCTYECLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIGELFHCAPN 308
Query: 303 VLHF-RNNEWGRMTLNQTFTIEPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILITE 361
+ H+ RN G M QTFTIEPM+ G + +W D+WTAVT DG SAQFEHT+L+TE
Sbjct: 309 IPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGKRSAQFEHTLLVTE 368
Query: 362 DGAEILT 368
G E+LT
Sbjct: 369 TGVEVLT 375
>Os07g0434700 Peptidase M24 family protein
Length = 126
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 100/136 (73%), Gaps = 24/136 (17%)
Query: 112 MRASGKLAAQVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVN 171
MRA+ +L A+VL++AGTLV+P TTDEID+AVHQMI+D GAYPSPLGY GFPKSVCTSVN
Sbjct: 1 MRAACELTARVLEYAGTLVKPLATTDEIDRAVHQMIIDAGAYPSPLGYGGFPKSVCTSVN 60
Query: 172 ECICHGIPDSRPLEDGDIINIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSA 231
ECICHGIPDSR L++GDIINIDVTVYLN GYHGDTS
Sbjct: 61 ECICHGIPDSRVLQNGDIINIDVTVYLN------------------------GYHGDTSR 96
Query: 232 TFLCGNVDDKAKKLVQ 247
T+LCG VD+ +LV+
Sbjct: 97 TYLCGEVDESTMQLVK 112
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,696,931
Number of extensions: 536679
Number of successful extensions: 1089
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1083
Number of HSP's successfully gapped: 5
Length of query: 370
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 268
Effective length of database: 11,709,973
Effective search space: 3138272764
Effective search space used: 3138272764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)