BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0712000 Os02g0712000|AK065045
         (914 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0712000  Peptidase, trypsin-like serine and cysteine do...  1805   0.0  

>Os02g0712000 Peptidase, trypsin-like serine and cysteine domain containing
           protein
          Length = 914

 Score = 1805 bits (4674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 881/914 (96%), Positives = 881/914 (96%)

Query: 1   MQAAXXXXXXXXXXPVVDCQGRAVALNXXXXXXXXXXFFLPLERVVRALNLIRDSWEAFG 60
           MQAA          PVVDCQGRAVALN          FFLPLERVVRALNLIRDSWEAFG
Sbjct: 1   MQAASGTKGGSSGSPVVDCQGRAVALNAGSKSSSASAFFLPLERVVRALNLIRDSWEAFG 60

Query: 61  SKPESDYIPRGTLQVTFQHKGFEETRRLGLRNETEQMVRLVSPSGETGMLVVDSVVPEGP 120
           SKPESDYIPRGTLQVTFQHKGFEETRRLGLRNETEQMVRLVSPSGETGMLVVDSVVPEGP
Sbjct: 61  SKPESDYIPRGTLQVTFQHKGFEETRRLGLRNETEQMVRLVSPSGETGMLVVDSVVPEGP 120

Query: 121 AHKHLEPGDVLVRMNDEVVTQFLAMETLLDDSVGKEIDLQIERGGTPLTVKLEVEDLHSI 180
           AHKHLEPGDVLVRMNDEVVTQFLAMETLLDDSVGKEIDLQIERGGTPLTVKLEVEDLHSI
Sbjct: 121 AHKHLEPGDVLVRMNDEVVTQFLAMETLLDDSVGKEIDLQIERGGTPLTVKLEVEDLHSI 180

Query: 181 TPNHFLEVSGAVIHPLSYQQARNFRFKCGLVYVAEAGYMLSRASVPRHAIIKKLAGEDIE 240
           TPNHFLEVSGAVIHPLSYQQARNFRFKCGLVYVAEAGYMLSRASVPRHAIIKKLAGEDIE
Sbjct: 181 TPNHFLEVSGAVIHPLSYQQARNFRFKCGLVYVAEAGYMLSRASVPRHAIIKKLAGEDIE 240

Query: 241 NLGDLIACISKLSRGARVPLEYVKYTDRYRNKSVLVTIDRHEWYAPPQLYTRNDATGLWT 300
           NLGDLIACISKLSRGARVPLEYVKYTDRYRNKSVLVTIDRHEWYAPPQLYTRNDATGLWT
Sbjct: 241 NLGDLIACISKLSRGARVPLEYVKYTDRYRNKSVLVTIDRHEWYAPPQLYTRNDATGLWT 300

Query: 301 AKSAIPPESPFIASAHHAGPIDAXXXXXXXXXXXXXMDLKCQHESENLTDGCIKTQTDDE 360
           AKSAIPPESPFIASAHHAGPIDA             MDLKCQHESENLTDGCIKTQTDDE
Sbjct: 301 AKSAIPPESPFIASAHHAGPIDANSNSVSSLPESSPMDLKCQHESENLTDGCIKTQTDDE 360

Query: 361 INVDGSHSSEDSLVEKKRRRVDEEIAAEGTISSSGDLDEIKGGGLRHLSSVDGSDLARTI 420
           INVDGSHSSEDSLVEKKRRRVDEEIAAEGTISSSGDLDEIKGGGLRHLSSVDGSDLARTI
Sbjct: 361 INVDGSHSSEDSLVEKKRRRVDEEIAAEGTISSSGDLDEIKGGGLRHLSSVDGSDLARTI 420

Query: 421 SSNASLAEQVIEPALVMFEVHVPPVCMLDGVHSQHFFGTGVIIYHSDCLGLVAVDRNTVA 480
           SSNASLAEQVIEPALVMFEVHVPPVCMLDGVHSQHFFGTGVIIYHSDCLGLVAVDRNTVA
Sbjct: 421 SSNASLAEQVIEPALVMFEVHVPPVCMLDGVHSQHFFGTGVIIYHSDCLGLVAVDRNTVA 480

Query: 481 VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASVVRAAKLLPEPALRR 540
           VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASVVRAAKLLPEPALRR
Sbjct: 481 VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASVVRAAKLLPEPALRR 540

Query: 541 GDSVYLVGLSRSLQATSRKSIITNPCTAVNIGSADCPRYRAINMEVIELDTDFGSAFSGI 600
           GDSVYLVGLSRSLQATSRKSIITNPCTAVNIGSADCPRYRAINMEVIELDTDFGSAFSGI
Sbjct: 541 GDSVYLVGLSRSLQATSRKSIITNPCTAVNIGSADCPRYRAINMEVIELDTDFGSAFSGI 600

Query: 601 LTDEQGRVQALWASFSTQLKYGCSSSEDHQFVRGIPIYAISQVLEKVISGTPGPFRIING 660
           LTDEQGRVQALWASFSTQLKYGCSSSEDHQFVRGIPIYAISQVLEKVISGTPGPFRIING
Sbjct: 601 LTDEQGRVQALWASFSTQLKYGCSSSEDHQFVRGIPIYAISQVLEKVISGTPGPFRIING 660

Query: 661 VRRPIPFIRLLEVELYPTLLSKARSYGLSDSWVQALAKKDPVRRQVLRVKGCLAGSKAEN 720
           VRRPIPFIRLLEVELYPTLLSKARSYGLSDSWVQALAKKDPVRRQVLRVKGCLAGSKAEN
Sbjct: 661 VRRPIPFIRLLEVELYPTLLSKARSYGLSDSWVQALAKKDPVRRQVLRVKGCLAGSKAEN 720

Query: 721 LLEQGDMILAINKEPITCFLDIENACQKLDQSVDSDGVLNMTIFRQGKEIDLIVGTDVRD 780
           LLEQGDMILAINKEPITCFLDIENACQKLDQSVDSDGVLNMTIFRQGKEIDLIVGTDVRD
Sbjct: 721 LLEQGDMILAINKEPITCFLDIENACQKLDQSVDSDGVLNMTIFRQGKEIDLIVGTDVRD 780

Query: 781 GNGTTRMVNWCGCIIQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEV 840
           GNGTTRMVNWCGCIIQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEV
Sbjct: 781 GNGTTRMVNWCGCIIQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEV 840

Query: 841 NGKPTPDLETFIQVVKGLENGEFVRVRTVHLNGKPRVLTLKQDLHYWPTWELRFEPETST 900
           NGKPTPDLETFIQVVKGLENGEFVRVRTVHLNGKPRVLTLKQDLHYWPTWELRFEPETST
Sbjct: 841 NGKPTPDLETFIQVVKGLENGEFVRVRTVHLNGKPRVLTLKQDLHYWPTWELRFEPETST 900

Query: 901 WKRGIIKALQSTVA 914
           WKRGIIKALQSTVA
Sbjct: 901 WKRGIIKALQSTVA 914



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.136    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 30,672,668
Number of extensions: 1312692
Number of successful extensions: 2999
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2997
Number of HSP's successfully gapped: 1
Length of query: 914
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 804
Effective length of database: 11,292,261
Effective search space: 9078977844
Effective search space used: 9078977844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 161 (66.6 bits)