BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0704500 Os02g0704500|AK059507
         (275 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0704500  Acid phosphatase/vanadium-dependent haloperoxi...   451   e-127

>Os02g0704500 Acid phosphatase/vanadium-dependent haloperoxidase family protein
          Length = 275

 Score =  451 bits (1159), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/230 (96%), Positives = 223/230 (96%)

Query: 46  VVVCMAEMARVGTGSSWEEELGVPEESDAILXXXXXXXQRRQATRWELVEARLNQTSKWL 105
           VVVCMAEMARVGTGSSWEEELGVPEESDAIL       QRRQATRWELVEARLNQTSKWL
Sbjct: 46  VVVCMAEMARVGTGSSWEEELGVPEESDAILGGGGGDGQRRQATRWELVEARLNQTSKWL 105

Query: 106 VAGCYTSAAIWKHDALIMWAMIGAVLNSMFSNLLKRIFNHERPVSALRSDPGMPSSHAQS 165
           VAGCYTSAAIWKHDALIMWAMIGAVLNSMFSNLLKRIFNHERPVSALRSDPGMPSSHAQS
Sbjct: 106 VAGCYTSAAIWKHDALIMWAMIGAVLNSMFSNLLKRIFNHERPVSALRSDPGMPSSHAQS 165

Query: 166 FLYSAVFLILSLFYWLGRTYLSVILGVAILAMCCYLSWLRVSQHLHTLNQVLVGAIVGSA 225
           FLYSAVFLILSLFYWLGRTYLSVILGVAILAMCCYLSWLRVSQHLHTLNQVLVGAIVGSA
Sbjct: 166 FLYSAVFLILSLFYWLGRTYLSVILGVAILAMCCYLSWLRVSQHLHTLNQVLVGAIVGSA 225

Query: 226 FGAMWFALFNLLVQEAFASSVPVQIAVTIGTAILCIGFVIHVVRHWFKDE 275
           FGAMWFALFNLLVQEAFASSVPVQIAVTIGTAILCIGFVIHVVRHWFKDE
Sbjct: 226 FGAMWFALFNLLVQEAFASSVPVQIAVTIGTAILCIGFVIHVVRHWFKDE 275



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.327    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,384,613
Number of extensions: 259447
Number of successful extensions: 647
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 648
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 176
Effective length of database: 11,866,615
Effective search space: 2088524240
Effective search space used: 2088524240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 155 (64.3 bits)