BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0610400 Os02g0610400|AK102477
         (467 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0610400  Lupus La protein family protein                     955   0.0  
Os04g0497600  Lupus La protein family protein                     560   e-160
Os08g0542900  Lupus La protein family protein                      65   7e-11

>Os02g0610400 Lupus La protein family protein
          Length = 467

 Score =  955 bits (2468), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/467 (100%), Positives = 467/467 (100%)

Query: 1   MAAATAAPSIDEAKAKSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARM 60
           MAAATAAPSIDEAKAKSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARM
Sbjct: 1   MAAATAAPSIDEAKAKSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARM 60

Query: 61  KSHLGLDAAVKPETVPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDS 120
           KSHLGLDAAVKPETVPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDS
Sbjct: 61  KSHLGLDAAVKPETVPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDS 120

Query: 121 RTVAASPLPYNVKLEDVQSFFAQYAKVNSVRLPRHISNKKHFCGTALVEFSEEDEAKIVL 180
           RTVAASPLPYNVKLEDVQSFFAQYAKVNSVRLPRHISNKKHFCGTALVEFSEEDEAKIVL
Sbjct: 121 RTVAASPLPYNVKLEDVQSFFAQYAKVNSVRLPRHISNKKHFCGTALVEFSEEDEAKIVL 180

Query: 181 ENNLFFAGANLEIKLKKEFDAETESKKEAYEKAHPKKDEQNEGYPKGLIVAFKLKRITVD 240
           ENNLFFAGANLEIKLKKEFDAETESKKEAYEKAHPKKDEQNEGYPKGLIVAFKLKRITVD
Sbjct: 181 ENNLFFAGANLEIKLKKEFDAETESKKEAYEKAHPKKDEQNEGYPKGLIVAFKLKRITVD 240

Query: 241 GGVQQNCADNDTATEEETPKSMKKTSTGESEERTTVNSDMEEQKSSDDMTEAKEVNAGEA 300
           GGVQQNCADNDTATEEETPKSMKKTSTGESEERTTVNSDMEEQKSSDDMTEAKEVNAGEA
Sbjct: 241 GGVQQNCADNDTATEEETPKSMKKTSTGESEERTTVNSDMEEQKSSDDMTEAKEVNAGEA 300

Query: 301 TESGDKCTVDALLESEKKGDNETSIKDDRGLSGKANSPISREDLKEAFKKFGTVRYVDFS 360
           TESGDKCTVDALLESEKKGDNETSIKDDRGLSGKANSPISREDLKEAFKKFGTVRYVDFS
Sbjct: 301 TESGDKCTVDALLESEKKGDNETSIKDDRGLSGKANSPISREDLKEAFKKFGTVRYVDFS 360

Query: 361 IGDESGYLRFEDSKAAEKARMSAVLADEGGLIVKDHIVTLEPVTGEAEKDYWNTIRGIQG 420
           IGDESGYLRFEDSKAAEKARMSAVLADEGGLIVKDHIVTLEPVTGEAEKDYWNTIRGIQG
Sbjct: 361 IGDESGYLRFEDSKAAEKARMSAVLADEGGLIVKDHIVTLEPVTGEAEKDYWNTIRGIQG 420

Query: 421 KYKDNRSYKGRTGKSYRGGKQFNGKRGRHSDSSEKGANKTQKVEAAA 467
           KYKDNRSYKGRTGKSYRGGKQFNGKRGRHSDSSEKGANKTQKVEAAA
Sbjct: 421 KYKDNRSYKGRTGKSYRGGKQFNGKRGRHSDSSEKGANKTQKVEAAA 467



>Os04g0497600 Lupus La protein family protein
          Length = 435

 Score =  560 bits (1444), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 298/458 (65%), Positives = 355/458 (77%), Gaps = 33/458 (7%)

Query: 10  IDEAKAKSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARMKSHLGLDAA 69
           +DEAKAK VLRQVEFYFSDSNLPRD FLR+TVE+ EDGLVSLALICSF+RMK HLGLD  
Sbjct: 11  LDEAKAKEVLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDLD 70

Query: 70  VKPETVPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDSRTVAASPLP 129
           VK ET+PEETVLAVAEVLRRS  LR++EDGK VGR+ EL K DEI++QVDSRT+AASP P
Sbjct: 71  VKQETMPEETVLAVAEVLRRSSALRVTEDGKKVGRSIELSKLDEIMEQVDSRTIAASPFP 130

Query: 130 YNVKLEDVQSFFAQYAKVNSVRLPRHISNKKHFCGTALVEFSEEDEAKIVLENNLFFAGA 189
           YNVKLEDVQSFFAQY KVNSVRLPRHI++K+HFCGTALVEFSEE+EA  VL+N L FA A
Sbjct: 131 YNVKLEDVQSFFAQYGKVNSVRLPRHIADKRHFCGTALVEFSEEEEANAVLKNTLVFAEA 190

Query: 190 NLEIKLKKEFDAETESKKEAYEKAHPKKDEQNEGYPKGLIVAFKLKRITVDGGVQQNCAD 249
           +LEIK KKEFD E E+KKEAYEK+ P K+  +EGYPKGLIVAFKLK I +DGG+ +N  D
Sbjct: 191 DLEIKPKKEFDTEREAKKEAYEKSQPTKNGHDEGYPKGLIVAFKLKIIQIDGGMAENGGD 250

Query: 250 NDTATEEETPKSMKKTSTGESEERTTVNSDMEEQKSSDDMTEAKEVNAGEATESGDKCTV 309
            +  T++       K+ TG  +E+   NSD++E   SDD+ ++KE  A            
Sbjct: 251 KEGETDD-----ANKSRTGH-DEKIPENSDIKED-LSDDVEKSKEAAA------------ 291

Query: 310 DALLESEKKGDNETSIKDDRGLSGKANSPISREDLKEAFKKFGTVRYVDFSIGDESGYLR 369
               +S KKG++ +   DD         PISRED KE F KFGTVRYVDFSIG++SGY+R
Sbjct: 292 ----QSVKKGESPSENADD---------PISREDFKEEFGKFGTVRYVDFSIGEDSGYIR 338

Query: 370 FEDSKAAEKARMSAVLADEGGLIVKDHIVTLEPVTGEAEKDYWNTIRGIQGKYKDNRSYK 429
           FEDSKAAEKAR  A ++DEGGLI+K H+VTLEPV+G+AEKDYW+ I+G QGKY+DNRS +
Sbjct: 339 FEDSKAAEKARALAAISDEGGLIMKGHLVTLEPVSGQAEKDYWSAIKGGQGKYRDNRSNR 398

Query: 430 GRTGKSYRGGKQFNGKRGRHSDSSEKGANKTQKVEAAA 467
           GR  K+ RGG+ F GKRGRHSD  E+ ANK +KV+AAA
Sbjct: 399 GRDWKNNRGGRHFGGKRGRHSDGHER-ANKARKVDAAA 435



>Os08g0542900 Lupus La protein family protein
          Length = 427

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 15/142 (10%)

Query: 10  IDEAKAKSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARMKSHLGLDAA 69
           I E  A+ V++QVEFYFSD NL   + L + + +  +G V ++++ SF +++        
Sbjct: 103 IPEDVARRVVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIR-------- 154

Query: 70  VKPETVPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDSRTVAASPLP 129
              E V E + LA   VLR S  L +S+DGK V R     +AD   ++V SR V A  L 
Sbjct: 155 ---ELVSERSALAA--VLRTSAELVVSDDGKRVRRRVLFTEAD--AEEVQSRIVVAENLR 207

Query: 130 YNVKLEDVQSFFAQYAKVNSVR 151
              +  ++   F+ +  V S+R
Sbjct: 208 EEHRYPNLMKIFSAFGSVKSIR 229



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.309    0.127    0.342 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,799,715
Number of extensions: 633159
Number of successful extensions: 2439
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2439
Number of HSP's successfully gapped: 3
Length of query: 467
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 363
Effective length of database: 11,605,545
Effective search space: 4212812835
Effective search space used: 4212812835
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 158 (65.5 bits)