BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0575200 Os02g0575200|AK069567
         (321 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0575200  DNA/pantothenate metabolism flavoprotein, C-te...   649   0.0  
Os08g0176100  Cornichon family protein                            422   e-118

>Os02g0575200 DNA/pantothenate metabolism flavoprotein, C-terminal domain
           containing protein
          Length = 321

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/321 (97%), Positives = 313/321 (97%)

Query: 1   MVAAEENPESFFAAAPPLRDADAVAARLGEFIARNSSXXXXXXXXRRIVCVTSGGTTVPL 60
           MVAAEENPESFFAAAPPLRDADAVAARLGEFIARNSS        RRIVCVTSGGTTVPL
Sbjct: 1   MVAAEENPESFFAAAPPLRDADAVAARLGEFIARNSSAAGAGGGGRRIVCVTSGGTTVPL 60

Query: 61  EQRCVRYIDNFSSGHRGAASTEYFLKAGYAVIFLHRRGSCQPYCRFLPDDSFLKFFDVDA 120
           EQRCVRYIDNFSSGHRGAASTEYFLKAGYAVIFLHRRGSCQPYCRFLPDDSFLKFFDVDA
Sbjct: 61  EQRCVRYIDNFSSGHRGAASTEYFLKAGYAVIFLHRRGSCQPYCRFLPDDSFLKFFDVDA 120

Query: 121 ESKVQVAECHAPVVKKAIGDYCKAIEGGYLLKLPFTTIFEYLQLLKMVATSISSAGPLGM 180
           ESKVQVAECHAPVVKKAIGDYCKAIEGGYLLKLPFTTIFEYLQLLKMVATSISSAGPLGM
Sbjct: 121 ESKVQVAECHAPVVKKAIGDYCKAIEGGYLLKLPFTTIFEYLQLLKMVATSISSAGPLGM 180

Query: 181 FYLAAAVSDFYVPWDSMAKHKIQSGGGPLDMRLSQVPKMLSVLRNQWAPLAFCISFKLET 240
           FYLAAAVSDFYVPWDSMAKHKIQSGGGPLDMRLSQVPKMLSVLRNQWAPLAFCISFKLET
Sbjct: 181 FYLAAAVSDFYVPWDSMAKHKIQSGGGPLDMRLSQVPKMLSVLRNQWAPLAFCISFKLET 240

Query: 241 DSDILIQKADMALNKYKMNIVVANLLATYKEEVIIVTDKERSTIRKMNKDEDLEMQIIKI 300
           DSDILIQKADMALNKYKMNIVVANLLATYKEEVIIVTDKERSTIRKMNKDEDLEMQIIKI
Sbjct: 241 DSDILIQKADMALNKYKMNIVVANLLATYKEEVIIVTDKERSTIRKMNKDEDLEMQIIKI 300

Query: 301 LSQNHSKYICGSTNGCVQSPY 321
           LSQNHSKYICGSTNGCVQSPY
Sbjct: 301 LSQNHSKYICGSTNGCVQSPY 321



>Os08g0176100 Cornichon family protein
          Length = 323

 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/301 (67%), Positives = 244/301 (81%), Gaps = 1/301 (0%)

Query: 9   ESFFAAAPPLRDADAVAARLGEFIARNSSXXXXXXXXRRIVCVTSGGTTVPLEQRCVRYI 68
           ESFF AAPPLRD D VA  L +F+AR+S           +VCVTSGGTTVPLEQRCVRYI
Sbjct: 13  ESFFRAAPPLRDQDRVAGDLADFVARHSGNGGGGRLAG-VVCVTSGGTTVPLEQRCVRYI 71

Query: 69  DNFSSGHRGAASTEYFLKAGYAVIFLHRRGSCQPYCRFLPDDSFLKFFDVDAESKVQVAE 128
           DNFSSG RGAASTEYFLKAGYAVIF++RRGS QPYCRFLP+DSFL  F++  ES +QV E
Sbjct: 72  DNFSSGQRGAASTEYFLKAGYAVIFIYRRGSKQPYCRFLPEDSFLDLFELGEESDIQVPE 131

Query: 129 CHAPVVKKAIGDYCKAIEGGYLLKLPFTTIFEYLQLLKMVATSISSAGPLGMFYLAAAVS 188
            HA VVK AI +Y KAI+ G LLKLPFTTIFEYLQLL+MV T+++  G  GMFYLAAAVS
Sbjct: 132 SHAAVVKTAIRNYRKAIDEGLLLKLPFTTIFEYLQLLQMVGTAMNCLGRQGMFYLAAAVS 191

Query: 189 DFYVPWDSMAKHKIQSGGGPLDMRLSQVPKMLSVLRNQWAPLAFCISFKLETDSDILIQK 248
           DFYVPW+SMAKHKI+S  GPL+M+L+QVPKML +LR QWAP AFC+SFKLETD DIL+QK
Sbjct: 192 DFYVPWESMAKHKIESASGPLNMQLNQVPKMLFILRKQWAPSAFCVSFKLETDPDILLQK 251

Query: 249 ADMALNKYKMNIVVANLLATYKEEVIIVTDKERSTIRKMNKDEDLEMQIIKILSQNHSKY 308
           A+ AL KY MN+VVAN LA YK+ V++VT   R+T+R+ +K++D+E Q+I +L + HS++
Sbjct: 252 AEAALRKYGMNVVVANELANYKDVVVMVTSNGRTTVRRPSKEDDVEEQLIDLLVEMHSEH 311

Query: 309 I 309
           I
Sbjct: 312 I 312



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.322    0.136    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,239,466
Number of extensions: 389528
Number of successful extensions: 817
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 816
Number of HSP's successfully gapped: 2
Length of query: 321
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 220
Effective length of database: 11,762,187
Effective search space: 2587681140
Effective search space used: 2587681140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)