BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0502500 Os02g0502500|AK100315
         (707 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0502500  Protein kinase-like domain containing protein      1372   0.0  

>Os02g0502500 Protein kinase-like domain containing protein
          Length = 707

 Score = 1372 bits (3550), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 666/707 (94%), Positives = 666/707 (94%)

Query: 1   MESQRGQSPDRGSDASGPKQXXXXXXXXXXXXXXXICKDFLRKFVDNELLTSSLEDWFSG 60
           MESQRGQSPDRGSDASGPKQ               ICKDFLRKFVDNELLTSSLEDWFSG
Sbjct: 1   MESQRGQSPDRGSDASGPKQSSVSSHGRQRNSSSSICKDFLRKFVDNELLTSSLEDWFSG 60

Query: 61  HSEDCGFKKPAFDVPFDLSELQNFDYAIEGVTFQQLVRMPNALHASTSDIFEATAHLALE 120
           HSEDCGFKKPAFDVPFDLSELQNFDYAIEGVTFQQLVRMPNALHASTSDIFEATAHLALE
Sbjct: 61  HSEDCGFKKPAFDVPFDLSELQNFDYAIEGVTFQQLVRMPNALHASTSDIFEATAHLALE 120

Query: 121 DFLHASIKGLWETFWGPDESMPFSVACIHSTSSKFYPAEKAISSGRLDGVCATAVLLKSL 180
           DFLHASIKGLWETFWGPDESMPFSVACIHSTSSKFYPAEKAISSGRLDGVCATAVLLKSL
Sbjct: 121 DFLHASIKGLWETFWGPDESMPFSVACIHSTSSKFYPAEKAISSGRLDGVCATAVLLKSL 180

Query: 181 KHSQGRWDHIVVLALLRPDIGMFSGQNDQQPSPAVLGEALFFAXXXXXXXXXXXXXXXXQ 240
           KHSQGRWDHIVVLALLRPDIGMFSGQNDQQPSPAVLGEALFFA                Q
Sbjct: 181 KHSQGRWDHIVVLALLRPDIGMFSGQNDQQPSPAVLGEALFFALRVLLSRSLSRSSTVLQ 240

Query: 241 NSDCVYVLLVDSQFGGVVNVQGDLNKLDFDLNNVYDSAAEWIKKHAQITVSSIDRVWNKL 300
           NSDCVYVLLVDSQFGGVVNVQGDLNKLDFDLNNVYDSAAEWIKKHAQITVSSIDRVWNKL
Sbjct: 241 NSDCVYVLLVDSQFGGVVNVQGDLNKLDFDLNNVYDSAAEWIKKHAQITVSSIDRVWNKL 300

Query: 301 GNANWGDIGTLQVLLAIFHSMIQFCGAPKYSLDELATEHSSRLQSRRSERHLVGRQANTN 360
           GNANWGDIGTLQVLLAIFHSMIQFCGAPKYSLDELATEHSSRLQSRRSERHLVGRQANTN
Sbjct: 301 GNANWGDIGTLQVLLAIFHSMIQFCGAPKYSLDELATEHSSRLQSRRSERHLVGRQANTN 360

Query: 361 GLFRFQQQSHSPEIVEVQEEGAVNVKPKEILKLEVGSVVLMEDADWQKGFQINDILTDSE 420
           GLFRFQQQSHSPEIVEVQEEGAVNVKPKEILKLEVGSVVLMEDADWQKGFQINDILTDSE
Sbjct: 361 GLFRFQQQSHSPEIVEVQEEGAVNVKPKEILKLEVGSVVLMEDADWQKGFQINDILTDSE 420

Query: 421 PPIYSATPVEEPTKTHLLYVGSSPSHLEPAWEDMNSWYQVQRQTKVLTLMKQRGISSRYV 480
           PPIYSATPVEEPTKTHLLYVGSSPSHLEPAWEDMNSWYQVQRQTKVLTLMKQRGISSRYV
Sbjct: 421 PPIYSATPVEEPTKTHLLYVGSSPSHLEPAWEDMNSWYQVQRQTKVLTLMKQRGISSRYV 480

Query: 481 PQMVASGRVVHPGPCNKPNSSGSCGHPWCSTPILVTSPVGETISNLIRNGLFGVEDALRC 540
           PQMVASGRVVHPGPCNKPNSSGSCGHPWCSTPILVTSPVGETISNLIRNGLFGVEDALRC
Sbjct: 481 PQMVASGRVVHPGPCNKPNSSGSCGHPWCSTPILVTSPVGETISNLIRNGLFGVEDALRC 540

Query: 541 CHDCXXXXXXXXXXGIRHGDIRPENVIRVSNGSRHPYFVLIGWGHAILEDRDRPLMNLFF 600
           CHDC          GIRHGDIRPENVIRVSNGSRHPYFVLIGWGHAILEDRDRPLMNLFF
Sbjct: 541 CHDCLSALAAASSAGIRHGDIRPENVIRVSNGSRHPYFVLIGWGHAILEDRDRPLMNLFF 600

Query: 601 SSTFALQEGKLCAASDAESLIYLLFFCCGGVCPELDSVEGALQWRETSWSRRVIQQKLGD 660
           SSTFALQEGKLCAASDAESLIYLLFFCCGGVCPELDSVEGALQWRETSWSRRVIQQKLGD
Sbjct: 601 SSTFALQEGKLCAASDAESLIYLLFFCCGGVCPELDSVEGALQWRETSWSRRVIQQKLGD 660

Query: 661 VSAVLKAFADYVDSICGTPYPMDYEIWLRRLRRTINEDHGKEIDTSS 707
           VSAVLKAFADYVDSICGTPYPMDYEIWLRRLRRTINEDHGKEIDTSS
Sbjct: 661 VSAVLKAFADYVDSICGTPYPMDYEIWLRRLRRTINEDHGKEIDTSS 707



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,729,855
Number of extensions: 958922
Number of successful extensions: 2303
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2302
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 599
Effective length of database: 11,396,689
Effective search space: 6826616711
Effective search space used: 6826616711
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)