BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0291000 Os02g0291000|009-095-H04
         (65 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0291000  EF-Hand type domain containing protein              138   1e-33
Os02g0291400                                                       77   3e-15
Os05g0534400  Similar to Calcineurin B-like protein 4 (SALT ...    64   2e-11

>Os02g0291000 EF-Hand type domain containing protein
          Length = 65

 Score =  138 bits (347), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 65/65 (100%), Positives = 65/65 (100%)

Query: 1  MCERLTESSHFKQIFDLFDLKRNGVIDFGEFVRSLNIFHPETPLAEKIACKKYPTSALPH 60
          MCERLTESSHFKQIFDLFDLKRNGVIDFGEFVRSLNIFHPETPLAEKIACKKYPTSALPH
Sbjct: 1  MCERLTESSHFKQIFDLFDLKRNGVIDFGEFVRSLNIFHPETPLAEKIACKKYPTSALPH 60

Query: 61 CIAYG 65
          CIAYG
Sbjct: 61 CIAYG 65



>Os02g0291400 
          Length = 246

 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 40/50 (80%)

Query: 1   MCERLTESSHFKQIFDLFDLKRNGVIDFGEFVRSLNIFHPETPLAEKIAC 50
           +CE     S   QIFDLFDLKRNGVIDFGEFVRSL+IFHPETPL +KIA 
Sbjct: 90  LCENADSVSPQVQIFDLFDLKRNGVIDFGEFVRSLSIFHPETPLGDKIAL 139



>Os05g0534400 Similar to Calcineurin B-like protein 4 (SALT OVERLY SENSITIVE 3
           protein)
          Length = 210

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 34/37 (91%)

Query: 13  QIFDLFDLKRNGVIDFGEFVRSLNIFHPETPLAEKIA 49
           ++FDLFDLKRNGVI+FGEFVRSL++FHP+ P +EK A
Sbjct: 74  RVFDLFDLKRNGVIEFGEFVRSLSVFHPKAPKSEKTA 110



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.326    0.142    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,166,343
Number of extensions: 66845
Number of successful extensions: 237
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 237
Number of HSP's successfully gapped: 3
Length of query: 65
Length of database: 17,035,801
Length adjustment: 37
Effective length of query: 28
Effective length of database: 15,103,883
Effective search space: 422908724
Effective search space used: 422908724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 149 (62.0 bits)