BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0290300 Os02g0290300|AK068360
         (786 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0290300  Nitrous oxide reductase, N-terminal domain con...  1499   0.0  
Os09g0296900  WD40-like domain containing protein                 959   0.0  

>Os02g0290300 Nitrous oxide reductase, N-terminal domain containing protein
          Length = 786

 Score = 1499 bits (3882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/786 (93%), Positives = 732/786 (93%)

Query: 1   MAEHWAEGSKHXXXXXXXXXXXXXXXXXXXXNIFDLLAQREISPRTKHQAKKLWSKSPGN 60
           MAEHWAEGSKH                    NIFDLLAQREISPRTKHQAKKLWSKSPGN
Sbjct: 1   MAEHWAEGSKHASAQASYSRYQATSARSRQRNIFDLLAQREISPRTKHQAKKLWSKSPGN 60

Query: 61  DADSNELRYAATDAKHDIYSWAESQSLHHWSAKYCPLLPPPRSTIAAAFSPDGKTLASTH 120
           DADSNELRYAATDAKHDIYSWAESQSLHHWSAKYCPLLPPPRSTIAAAFSPDGKTLASTH
Sbjct: 61  DADSNELRYAATDAKHDIYSWAESQSLHHWSAKYCPLLPPPRSTIAAAFSPDGKTLASTH 120

Query: 121 GDHTVKIIDYQTGKCLKVLSGHRRTPWVVRYHPLLPDILASGSLDQEVRLWDAKTSDCIG 180
           GDHTVKIIDYQTGKCLKVLSGHRRTPWVVRYHPLLPDILASGSLDQEVRLWDAKTSDCIG
Sbjct: 121 GDHTVKIIDYQTGKCLKVLSGHRRTPWVVRYHPLLPDILASGSLDQEVRLWDAKTSDCIG 180

Query: 181 SQDFHRPIASIAFHARGEILAVASGHKLYIWNYNKRDEAAAPTIILRTRRSLRAVHFHPH 240
           SQDFHRPIASIAFHARGEILAVASGHKLYIWNYNKRDEAAAPTIILRTRRSLRAVHFHPH
Sbjct: 181 SQDFHRPIASIAFHARGEILAVASGHKLYIWNYNKRDEAAAPTIILRTRRSLRAVHFHPH 240

Query: 241 GAPYLLTAEVNNLDSADSPLTLATSSGYSNYPSAVFFANINSRNCPHHEANSSSPCLLWP 300
           GAPYLLTAEVNNLDSADSPLTLATSSGYSNYPSAVFFANINSRNCPHHEANSSSPCLLWP
Sbjct: 241 GAPYLLTAEVNNLDSADSPLTLATSSGYSNYPSAVFFANINSRNCPHHEANSSSPCLLWP 300

Query: 301 AYLRDDGSLCLIRNDLVSSSTNVHQRPSSLAQNPLASDVENQQPDQLVTPMDVCPGEPST 360
           AYLRDDGSLCLIRNDLVSSSTNVHQRPSSLAQNPLASDVENQQPDQLVTPMDVCPGEPST
Sbjct: 301 AYLRDDGSLCLIRNDLVSSSTNVHQRPSSLAQNPLASDVENQQPDQLVTPMDVCPGEPST 360

Query: 361 SHASASGLSGVEMQIDRGQPXXXXXXXXXXXXXXXXTARDDVQMPSLSNSVPIPATSQPS 420
           SHASASGLSGVEMQIDRGQP                TARDDVQMPSLSNSVPIPATSQPS
Sbjct: 361 SHASASGLSGVEMQIDRGQPSSRLLGSSSTSNHESSTARDDVQMPSLSNSVPIPATSQPS 420

Query: 421 EHDGRHGMPMNSFTTSSGLDVHMILRNSEGGNHHHDLFSDSRSWELPFLQGWFMAQNHTG 480
           EHDGRHGMPMNSFTTSSGLDVHMILRNSEGGNHHHDLFSDSRSWELPFLQGWFMAQNHTG
Sbjct: 421 EHDGRHGMPMNSFTTSSGLDVHMILRNSEGGNHHHDLFSDSRSWELPFLQGWFMAQNHTG 480

Query: 481 ASPSIPIDVGSSRGSNRHHAXXXXXXXXXXXXXXXXXXPQIDEAEVHAASLGVGSELTTS 540
           ASPSIPIDVGSSRGSNRHHA                  PQIDEAEVHAASLGVGSELTTS
Sbjct: 481 ASPSIPIDVGSSRGSNRHHASRRHVVGSLRGVGSSLLGPQIDEAEVHAASLGVGSELTTS 540

Query: 541 LLAAGAAELPCTVKLRIWRHDIKDPCVTLEPEACRLTISHAVLCSEMGAHFSPCGRFLVA 600
           LLAAGAAELPCTVKLRIWRHDIKDPCVTLEPEACRLTISHAVLCSEMGAHFSPCGRFLVA
Sbjct: 541 LLAAGAAELPCTVKLRIWRHDIKDPCVTLEPEACRLTISHAVLCSEMGAHFSPCGRFLVA 600

Query: 601 CVACLLPQTEGDRGSQLPVQYDSAGAGTSPTRHPLPSHRVIYELRVYSLEEATFGKVLTS 660
           CVACLLPQTEGDRGSQLPVQYDSAGAGTSPTRHPLPSHRVIYELRVYSLEEATFGKVLTS
Sbjct: 601 CVACLLPQTEGDRGSQLPVQYDSAGAGTSPTRHPLPSHRVIYELRVYSLEEATFGKVLTS 660

Query: 661 RAIRAAHCLTSIQFSPTSEHILLAYGRRHNSMLRSIVMDGETGIPVYTILEVYRVSDMEL 720
           RAIRAAHCLTSIQFSPTSEHILLAYGRRHNSMLRSIVMDGETGIPVYTILEVYRVSDMEL
Sbjct: 661 RAIRAAHCLTSIQFSPTSEHILLAYGRRHNSMLRSIVMDGETGIPVYTILEVYRVSDMEL 720

Query: 721 VRVLPSAEDEVNVACFHPSPGGGLVYGTKEGKLRILQHNGADITSTGLNCFIEENMLEIQ 780
           VRVLPSAEDEVNVACFHPSPGGGLVYGTKEGKLRILQHNGADITSTGLNCFIEENMLEIQ
Sbjct: 721 VRVLPSAEDEVNVACFHPSPGGGLVYGTKEGKLRILQHNGADITSTGLNCFIEENMLEIQ 780

Query: 781 RYALEG 786
           RYALEG
Sbjct: 781 RYALEG 786



>Os09g0296900 WD40-like domain containing protein
          Length = 799

 Score =  959 bits (2480), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/808 (62%), Positives = 561/808 (69%), Gaps = 59/808 (7%)

Query: 1   MAEHWAEGSKHXXXXXXXXXXXXXXXXX-----XXXNIFDLLAQREISPRTKHQAKKLWS 55
           M E W EGSK+                         NI+ LLAQREISPRTKHQAK +WS
Sbjct: 4   MTESWIEGSKNTSAPESVSCSVSRYESSPPRRLGKRNIYHLLAQREISPRTKHQAKNIWS 63

Query: 56  KSPGNDADSNELRYAATDAKHDIYSWAESQSLHHWSAKYCPLLPPPRSTIAAAFSPDGKT 115
            SP     S EL +  TDA+HD++SWAESQSLH WSA+YC LLP PRSTIAAAFSPDG+T
Sbjct: 64  GSPECATGSIELAFWVTDARHDLFSWAESQSLHRWSARYCLLLPAPRSTIAAAFSPDGRT 123

Query: 116 LASTHGDHTVKIIDYQTGKCLKVLSGHRRTPWVVRYHPLLPDILASGSLDQEVRLWDAKT 175
           LASTHGDHTVKIID QTGKCLKVL GH RTPWVVRYHPL PDI+ASGSLD EV LWDAKT
Sbjct: 124 LASTHGDHTVKIIDCQTGKCLKVLLGHWRTPWVVRYHPLHPDIVASGSLDNEVCLWDAKT 183

Query: 176 SDCIGSQDFHRPIASIAFHARGEILAVASGHKLYIWNYNKRDEAAAPTIILRTRRSLRAV 235
           S CIGS  F++ IASIAFHA+GE+LAVASGHKL+IW+YNKRDEA+ P +ILRTRRSLRAV
Sbjct: 184 SRCIGSHFFYKQIASIAFHAKGELLAVASGHKLFIWDYNKRDEASDPPMILRTRRSLRAV 243

Query: 236 HFHPHGAPYLLTAEVNNLDSADSPLTLATSSGYSNYPSAVFFANINSRNCPHHEANSSSP 295
            FHP+GAPYLLTAEVNNLDSADS LT ATSSGYSN PSAVFFA +NS  CP+ E+  SSP
Sbjct: 244 QFHPNGAPYLLTAEVNNLDSADSELTHATSSGYSNSPSAVFFAIMNSACCPYSESRFSSP 303

Query: 296 CLLWPAYLRDDGSLCLIRNDLVSSSTNVHQRPSSLAQNPLASDVENQQPDQLVTPMDVCP 355
           CL+WPAY+RDDGS+CL+RND VS S++V Q           SD E QQ   +VTPMDVCP
Sbjct: 304 CLIWPAYVRDDGSICLLRNDWVSGSSDVQQ----------PSDSETQQAGHMVTPMDVCP 353

Query: 356 GEPSTSHASASGLSGVEMQIDRGQPXXXXXXXXXXXXXXXXTARDDV-QMPSLSNSVPIP 414
           GEP  ++      + +  +I+   P                  R D+ Q+  LS+  P P
Sbjct: 354 GEPGVNNYDDEDSASLSNRIEMHTPSWQNSSRFHNSSAATDLHRIDIRQVSDLSSDTPNP 413

Query: 415 ATSQPSEHDGRHGMPMNSFTTSSGLDVHMILRNSEGGNHHHDLFSDSRSWELPFLQGWFM 474
                S  D  + MPM+ F  S+ +DV M LR+ E G+HH++    S SWELPFLQGW M
Sbjct: 414 EMPAHSRIDVPNSMPMDLFAFSNTIDVQMFLRDVEAGHHHNNYTGGSHSWELPFLQGWLM 473

Query: 475 AQNHTGA---------------------------------------SPSIPIDVGSSRGS 495
           AQN TG                                        S SIPI   S RG 
Sbjct: 474 AQNRTGLRATLPNNEVIGDLPIGGTAGTDNVMNESSNMYSFERVGPSSSIPITTDSLRGL 533

Query: 496 NRHHAXXXXXXXXXXXXXXXXXXPQIDEAEVHAASLGVGSELTTSLLAAGAAELPCTVKL 555
           ++H                     Q  EA V+  SLGVGSE  TSL A    ELPCTVKL
Sbjct: 534 SKHRHMLASVPGGAGTSLQGA---QNGEAHVNVVSLGVGSEFATSLFAGDGTELPCTVKL 590

Query: 556 RIWRHDIKDPCVTLEPEACRLTISHAVLCSEMGAHFSPCGRFLVACVACLLPQTE-GDRG 614
           RIWRH+I +PC  L PEAC LTISHAVLCSEMG HFSPCGRFLVACVACLLPQTE G+  
Sbjct: 591 RIWRHNIDNPCAVLAPEACCLTISHAVLCSEMGTHFSPCGRFLVACVACLLPQTEVGEHV 650

Query: 615 SQLPVQYDSAGAGTSPTRHPLPSHRVIYELRVYSLEEATFGKVLTSRAIRAAHCLTSIQF 674
           SQ PVQYDS GAGTSPTRHPLPS RVIYELRVYSLEE TFG VL SRAIRAAHCLTSIQF
Sbjct: 651 SQSPVQYDSTGAGTSPTRHPLPSRRVIYELRVYSLEEETFGTVLVSRAIRAAHCLTSIQF 710

Query: 675 SPTSEHILLAYGRRHNSMLRSIVMDGETGIPVYTILEVYRVSDMELVRVLPSAEDEVNVA 734
           SPTSEHILLAYGRRHNS+LR I MDG+T IPVYT+LEVYRVSDMELVRV+PSAEDEVNVA
Sbjct: 711 SPTSEHILLAYGRRHNSLLRGIFMDGKTTIPVYTVLEVYRVSDMELVRVIPSAEDEVNVA 770

Query: 735 CFHPSPGGGLVYGTKEGKLRILQHNGAD 762
           CFHPSPG GLVYGTKEGKLRI+QHN AD
Sbjct: 771 CFHPSPGAGLVYGTKEGKLRIIQHNVAD 798



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.132    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,967,519
Number of extensions: 1224334
Number of successful extensions: 3524
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3534
Number of HSP's successfully gapped: 3
Length of query: 786
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 677
Effective length of database: 11,344,475
Effective search space: 7680209575
Effective search space used: 7680209575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)