Os02g0290300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nitrous oxide reductase, N-terminal domain containing protein.
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Os02g0290300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nitrous oxide reductase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.7 | 0.214 | 10 | 1.02 | 0.366 | -0.554 | -0.168 | 6.07 | -0.032 | 5 | 29.83 | 2607 | -- | -- |
| 24.61 | 0.233 | 10.2 | -0.139 | 0.39 | -0.104 | -0.112 | -- | -0.154 | 5.09 | 18 | 36373 | -- | -- |
| 20.76 | 0.212 | 10 | 1.02 | 0.364 | -0.558 | -- | 6.07 | -0.0316 | 4.93 | 29.83 | 2609 | -- | -- |
| 24.16 | 0.229 | 10.2 | -0.303 | 0.404 | 0.154 | -- | -- | -0.234 | 4.9 | 32.2 | 35073 | -- | -- |
| 27.69 | 0.245 | 10 | 1.06 | -- | -0.541 | -- | 6.22 | -0.0152 | -- | 29.8 | 2627 | -- | -- |
| 24.73 | 0.233 | 10.2 | -0.158 | 0.392 | -- | -0.111 | -- | -0.16 | 5.04 | -- | -- | -- | -- |
| 24.76 | 0.233 | 10.2 | -0.158 | 0.391 | -- | -- | -- | -0.159 | 4.98 | -- | -- | -- | -- |
| 30.48 | 0.257 | 10.2 | -0.251 | -- | 0.313 | -- | -- | -0.261 | -- | 34.1 | 16252 | -- | -- |
| 25.12 | 0.233 | 10.2 | -- | 0.37 | 0.0616 | -- | -- | -0.165 | 4.98 | 31.31 | 27136 | -- | -- |
| 32.81 | 0.268 | 10.2 | -0.143 | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
| 25.41 | 0.236 | 10.2 | -- | 0.388 | -- | -- | -- | -0.142 | 4.99 | -- | -- | -- | -- |
| 31.89 | 0.263 | 10.2 | -- | -- | 0.237 | -- | -- | -0.21 | -- | 34 | 15672 | -- | -- |
| 33.35 | 0.27 | 10.2 | -- | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.90 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 2 | 20.94 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 3 | 20.96 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 4 | 20.97 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 7 | 21.00 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 11 | 21.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 12 | 21.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 14 | 21.03 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 16 | 21.03 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 19 | 21.06 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 22 | 21.07 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 27 | 21.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 31 | 21.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 32 | 21.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 35 | 21.10 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 36 | 21.10 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 40 | 21.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 42 | 21.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 52 | 21.14 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 65 | 21.17 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 68 | 21.17 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 76 | 21.18 | humidity | 70.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 86 | 21.20 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 129 | 21.22 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 142 | 21.24 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 158 | 21.24 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 163 | 21.24 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 177 | 21.26 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 178 | 21.26 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 200 | 21.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 223 | 21.27 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 225 | 21.27 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 236 | 21.28 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 259 | 21.28 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 17 |
| 293 | 21.30 | humidity | 70.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 304 | 21.30 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 323 | 21.30 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 18 |
| 359 | 21.32 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 361 | 21.32 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 434 | 21.34 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 536 | 21.35 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 538 | 21.36 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 562 | 21.36 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 571 | 21.36 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 10 |
| 578 | 21.36 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 8 | 13 |
| 601 | 21.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 619 | 21.37 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 0 | NA |
| 623 | 21.37 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |
| 624 | 21.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 716 | 21.38 | temperature | 30.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 720 | 21.38 | humidity | 60.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 789 | 21.38 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 827 | 21.39 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 977 | 21.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 981 | 21.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 997 | 21.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 22 |