BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0224400 Os02g0224400|AK064268
         (506 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0224400  Similar to Xaa-Pro dipeptidase (EC 3.4.13.9) (...  1024   0.0  
Os12g0563500  Peptidase M24 family protein                        132   8e-31

>Os02g0224400 Similar to Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)
           (Proline dipeptidase) (Prolidase) (Imidodipeptidase)
          Length = 506

 Score = 1024 bits (2648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/488 (100%), Positives = 488/488 (100%)

Query: 19  EVPMELHAGNRDRLVAALRAHLSASGRPLRGLVLLQGGEEQTRYCTDHLELFRQESYFAY 78
           EVPMELHAGNRDRLVAALRAHLSASGRPLRGLVLLQGGEEQTRYCTDHLELFRQESYFAY
Sbjct: 19  EVPMELHAGNRDRLVAALRAHLSASGRPLRGLVLLQGGEEQTRYCTDHLELFRQESYFAY 78

Query: 79  LFGVREPGFYGAIDIVSGQSILFSPRLPADYAVWMGEIKPLSYFKDRYKVDMVFYVDEIT 138
           LFGVREPGFYGAIDIVSGQSILFSPRLPADYAVWMGEIKPLSYFKDRYKVDMVFYVDEIT
Sbjct: 79  LFGVREPGFYGAIDIVSGQSILFSPRLPADYAVWMGEIKPLSYFKDRYKVDMVFYVDEIT 138

Query: 139 QVLQDRFSDHGKPLLFVLYGKNTDSGNYSKPASFEGMEKFDSDLSTLHPILTECRVIKSD 198
           QVLQDRFSDHGKPLLFVLYGKNTDSGNYSKPASFEGMEKFDSDLSTLHPILTECRVIKSD
Sbjct: 139 QVLQDRFSDHGKPLLFVLYGKNTDSGNYSKPASFEGMEKFDSDLSTLHPILTECRVIKSD 198

Query: 199 MELALIQYANDVSSEAHIEVMRRAKPGMKEYQLESIFLHHVYMYGGCRHCSYTCICATGE 258
           MELALIQYANDVSSEAHIEVMRRAKPGMKEYQLESIFLHHVYMYGGCRHCSYTCICATGE
Sbjct: 199 MELALIQYANDVSSEAHIEVMRRAKPGMKEYQLESIFLHHVYMYGGCRHCSYTCICATGE 258

Query: 259 NSSVLHYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFNSNQTIVYNAV 318
           NSSVLHYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFNSNQTIVYNAV
Sbjct: 259 NSSVLHYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFNSNQTIVYNAV 318

Query: 319 LKAHNAVIAHMRPGVNWLDMHKLAEQTILESLKNERILHGDVTDMMAQRLGAVFMPHGLG 378
           LKAHNAVIAHMRPGVNWLDMHKLAEQTILESLKNERILHGDVTDMMAQRLGAVFMPHGLG
Sbjct: 319 LKAHNAVIAHMRPGVNWLDMHKLAEQTILESLKNERILHGDVTDMMAQRLGAVFMPHGLG 378

Query: 379 HLLGIDTHDPGGYPEGLERPKEPGLSSLRTIRELKEGMVITVEPGCYFIDALLIPARDDP 438
           HLLGIDTHDPGGYPEGLERPKEPGLSSLRTIRELKEGMVITVEPGCYFIDALLIPARDDP
Sbjct: 379 HLLGIDTHDPGGYPEGLERPKEPGLSSLRTIRELKEGMVITVEPGCYFIDALLIPARDDP 438

Query: 439 VSSKFFNWEEIEKYKSFGGVRIESDVYVTAHGCKNLTNCPRETWEIEAVMAGAPWPVRAT 498
           VSSKFFNWEEIEKYKSFGGVRIESDVYVTAHGCKNLTNCPRETWEIEAVMAGAPWPVRAT
Sbjct: 439 VSSKFFNWEEIEKYKSFGGVRIESDVYVTAHGCKNLTNCPRETWEIEAVMAGAPWPVRAT 498

Query: 499 NNSLSKAS 506
           NNSLSKAS
Sbjct: 499 NNSLSKAS 506



>Os12g0563500 Peptidase M24 family protein
          Length = 495

 Score =  132 bits (331), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 203/445 (45%), Gaps = 48/445 (10%)

Query: 46  PLRGLVLLQGGEEQTRYCTDHLEL-FRQESYFAYLFGVREPGFYGAIDIVSGQSILFSPR 104
           P + L ++   E+Q    TD +   FRQ   + Y+ G  +PG    +   +G   +F P 
Sbjct: 79  PEKSLAIIASAEQQ--MMTDVVPYSFRQNGDYLYITGCAQPGGVAVLSEETGLC-MFMPD 135

Query: 105 LPADYAVWMGEIKPLSYFKDRYKVDMVFYVDEITQVLQDRFSDHGKPLLFVLYGKNTDSG 164
              +  VW G+   +   ++ +K D  F + E+ ++L +           V +   T S 
Sbjct: 136 TSKEDVVWQGQTAGVEAAENFFKADKAFPLSEMQKILPEMIERSK----VVYHNVKTLSP 191

Query: 165 NYSKPASFEGMEKFDSDLSTLHPILTECRVIKSDMELALIQYANDVSSEAHIEVMRRAKP 224
           +Y    SF      ++ +  +     E R IKS  E+ L++ +  + S++ ++ M  ++ 
Sbjct: 192 SYKNLDSFR-RASLNNKVKDIAYYTDELRWIKSKSEIGLMRESASIVSQSLLQTMLLSRT 250

Query: 225 GMKEYQLESIFLHHVYMYGGCRHCSYTCICATGENSSVLHYGHAAAPNDRTLNDGDMALM 284
             +E QL +   +   M G  R  ++  +   G N SV+HY      ND  +  G++ LM
Sbjct: 251 HREESQLAAKIEYECKMRGAQR-MAFHPVVGGGANGSVIHYSR----NDGRVKAGELLLM 305

Query: 285 DMGGEYHCYGSDITCSYPINGKFNSNQTIVYNAVLKAHNAVIAHMRPGVNWLDMHKLAEQ 344
           D+G EYH Y SD+T ++P  G+F+  Q  +Y+ +L+ +   I   +PG +  ++H  + +
Sbjct: 306 DVGCEYHGYLSDLTRTWPPCGRFSPAQEELYSLILETNKECIKLCKPGASINEIHNHSVK 365

Query: 345 TILESLKNERILHGDVTDMMAQRLGAVFMPHGLGHLLGIDTHDPGGYPEGLERPKEPGLS 404
            +++  +   IL    +            P  +GH LG+D HD     +  ++P EPG+ 
Sbjct: 366 MLIKGFQELGILEKGKSIQY-----NYLNPTAIGHSLGMDIHDSVKLSK--DKPLEPGV- 417

Query: 405 SLRTIRELKEGMVITVEPGCYFIDALLIPARDDPVSSKFFNWEEIEKYKSFGGVRIESDV 464
                       +IT+EPG Y I  + I   + P           ++Y+   G+RIE +V
Sbjct: 418 ------------IITIEPGVY-IPPVPILKENAP-----------DRYRGI-GIRIEDEV 452

Query: 465 YVTAHGCKNLT-NCPRETWEIEAVM 488
            +T  G + LT + P+E   I  +M
Sbjct: 453 LITESGHEVLTASVPKEISHITTLM 477



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,680,405
Number of extensions: 776355
Number of successful extensions: 1389
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1384
Number of HSP's successfully gapped: 2
Length of query: 506
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 401
Effective length of database: 11,553,331
Effective search space: 4632885731
Effective search space used: 4632885731
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)