Os02g0224400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase).
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Os02g0224400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.49 | 0.218 | 9.19 | -0.366 | 0.728 | -0.453 | 0.514 | 0.00183 | -0.00842 | 2.35 | 1009 | 8147 | -- | -- |
| 21.49 | 0.216 | 9.19 | -0.359 | 0.729 | -0.452 | 0.515 | -- | -0.00391 | 2.34 | 1009 | 8137 | -- | -- |
| 22.45 | 0.221 | 9.19 | -0.376 | 0.729 | -0.449 | -- | 0.00661 | -0.00408 | 2.39 | 1009 | 8135 | -- | -- |
| 22.45 | 0.221 | 9.19 | -0.378 | 0.73 | -0.449 | -- | -- | -0.00442 | 2.39 | 1009 | 8135 | -- | -- |
| 53.13 | 0.339 | 9.18 | -0.388 | -- | -0.416 | -- | 0.0732 | 0.0309 | -- | 1009 | 12073 | -- | -- |
| 28.71 | 0.251 | 9.2 | -0.552 | 0.709 | -- | 0.463 | -- | -0.0735 | 2.33 | -- | -- | -- | -- |
| 29.5 | 0.254 | 9.21 | -0.565 | 0.711 | -- | -- | -- | -0.0763 | 2.36 | -- | -- | -- | -- |
| 53.1 | 0.339 | 9.18 | -0.42 | -- | -0.455 | -- | -- | 0.0303 | -- | 1009 | 12150 | -- | -- |
| 25.83 | 0.237 | 9.17 | -- | 0.751 | -0.555 | -- | -- | 0.0507 | 2.41 | 1009 | 8130 | -- | -- |
| 59.42 | 0.36 | 9.2 | -0.535 | -- | -- | -- | -- | -0.0589 | -- | -- | -- | -- | -- |
| 37.91 | 0.288 | 9.19 | -- | 0.7 | -- | -- | -- | -0.0134 | 2.35 | -- | -- | -- | -- |
| 55.86 | 0.348 | 9.16 | -- | -- | -0.579 | -- | -- | 0.0971 | -- | 1009 | 29435 | -- | -- |
| 66.97 | 0.382 | 9.19 | -- | -- | -- | -- | -- | 0.000462 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 20 | 22.36 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 28 | 22.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 42 | 22.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 63 | 22.45 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 82 | 22.50 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 86 | 22.51 | temperature | 25 | 10 | > th | dose dependent | sin | 1 | NA |
| 92 | 22.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 134 | 22.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 192 | 22.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 195 | 22.78 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 196 | 22.78 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 11 |
| 206 | 22.82 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 11 |
| 224 | 22.86 | temperature | 25 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 229 | 22.88 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 236 | 22.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 244 | 22.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 252 | 22.92 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 256 | 22.93 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 257 | 22.93 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 313 | 22.99 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 342 | 23.01 | wind | 9 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 356 | 23.01 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 361 | 23.02 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 22 | NA |
| 370 | 23.02 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 396 | 23.03 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 433 | 23.04 | wind | 7 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 486 | 23.05 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 487 | 23.05 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 563 | 23.05 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 613 | 23.06 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 621 | 23.06 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 15 | 22 |
| 688 | 23.08 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 689 | 23.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 694 | 23.08 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 730 | 23.09 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 762 | 23.10 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 772 | 23.10 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 886 | 23.12 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 952 | 23.14 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 967 | 23.14 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 992 | 23.15 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 993 | 23.15 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 1 |