BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0210800 Os02g0210800|AK073717
(201 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0210800 UDP-glucuronosyl/UDP-glucosyltransferase famil... 411 e-115
Os01g0867600 Similar to UDP-glucose:sterol glucosyltransfer... 94 6e-20
Os04g0131900 Similar to UDP-glucose:sterol glucosyltransfer... 81 4e-16
Os04g0131850 Conserved hypothetical protein 72 3e-13
>Os02g0210800 UDP-glucuronosyl/UDP-glucosyltransferase family protein
Length = 201
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 VPSMGFLRNPKAFLMVLKAVIEKTDYRFILFSSGYQPLDSAIQYFAPSVAESSEYQASAL 60
VPSMGFLRNPKAFLMVLKAVIEKTDYRFILFSSGYQPLDSAIQYFAPSVAESSEYQASAL
Sbjct: 1 VPSMGFLRNPKAFLMVLKAVIEKTDYRFILFSSGYQPLDSAIQYFAPSVAESSEYQASAL 60
Query: 61 HCDSNLLFNGRLFCFSGSIPYSWLFPKCAVAIHHAGSGSTAAALFAGIPQISCPFLLDQF 120
HCDSNLLFNGRLFCFSGSIPYSWLFPKCAVAIHHAGSGSTAAALFAGIPQISCPFLLDQF
Sbjct: 61 HCDSNLLFNGRLFCFSGSIPYSWLFPKCAVAIHHAGSGSTAAALFAGIPQISCPFLLDQF 120
Query: 121 YWAERLHWLGVAPEPLGRQHLIPDTDNASSINSAADMLIGAIKSALSPEIKAQATRIANK 180
YWAERLHWLGVAPEPLGRQHLIPDTDNASSINSAADMLIGAIKSALSPEIKAQATRIANK
Sbjct: 121 YWAERLHWLGVAPEPLGRQHLIPDTDNASSINSAADMLIGAIKSALSPEIKAQATRIANK 180
Query: 181 LSSEDGIGEALRILKESFAPN 201
LSSEDGIGEALRILKESFAPN
Sbjct: 181 LSSEDGIGEALRILKESFAPN 201
>Os01g0867600 Similar to UDP-glucose:sterol glucosyltransferase (EC 2.4.1.173)
Length = 620
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 80 PYSWLFPKCAVAIHHAGSGSTAAALFAGIPQISCPFLLDQFYWAERLHWLGVAPEPLGRQ 139
P+ WLFP+CA +HH G+G+TAA L AG P PF DQF+W ER+H GV P P+
Sbjct: 477 PHDWLFPRCAAVVHHGGAGTTAAGLVAGCPTTIVPFFGDQFFWGERIHAQGVGPAPIPIA 536
Query: 140 HLIPDTDNASSINSAADMLIGAIKSALSPEIKAQATRIANKLSSEDGIGEAL 191
L + L AI+ L PE+K++ +A + +EDG+ A+
Sbjct: 537 EL------------TVEALSNAIRFMLDPEVKSRTMELAIAIGNEDGVAAAV 576
>Os04g0131900 Similar to UDP-glucose:sterol glucosyltransferase (EC 2.4.1.173)
Length = 609
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 80 PYSWLFPKCAVAIHHAGSGSTAAALFAGIPQISCPFLLDQFYWAERLHWLGVAPEPLGRQ 139
P+ WLF +C +HH G+G+TAA L A P PF DQ +W +R+H GV P P+
Sbjct: 474 PHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPLPIPVD 533
Query: 140 HLIPDTDNASSINSAADMLIGAIKSALSPEIKAQATRIANKLSSEDGIGEALR 192
+ L+ AI + P++K A +A + SEDG+ A+R
Sbjct: 534 QF------------SLQKLVDAINFMMEPKVKDNAVELAKAMESEDGVSGAVR 574
>Os04g0131850 Conserved hypothetical protein
Length = 354
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 80 PYSWLFPKCAV---------AIHHAGSGSTAAALFAGIPQISCPFLLDQFYWAERLHWLG 130
P+ WLF +C +HH G+G+TAA L A P PF DQ +W +R+H G
Sbjct: 172 PHDWLFLQCKAVLLIMSSFHGVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARG 231
Query: 131 VAPEPLGRQHLIPDTDNASSINSAADMLIGAIKSALSPEIKAQATRIANKLSSEDGIGEA 190
V P P+ + L+ AI + P++K +A +A + SEDG+
Sbjct: 232 VGPLPIPVDQF------------SLRKLVDAINFMMEPKVKEKAVELAKAMESEDGVSGV 279
Query: 191 LR 192
+R
Sbjct: 280 VR 281
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,770,951
Number of extensions: 285599
Number of successful extensions: 782
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 779
Number of HSP's successfully gapped: 4
Length of query: 201
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 105
Effective length of database: 12,023,257
Effective search space: 1262441985
Effective search space used: 1262441985
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)