BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0931300 Os01g0931300|AK068196
         (507 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0931300  Tafazzin family protein                             991   0.0  
Os04g0667000  Tafazzin family protein                              92   1e-18

>Os01g0931300 Tafazzin family protein
          Length = 507

 Score =  991 bits (2561), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/507 (97%), Positives = 493/507 (97%)

Query: 1   MAPMAGGGGVPWGDRARVVGAQIRSRFRVGVAPXXXXXXXXXXXXXXASEAVRQWTERVR 60
           MAPMAGGGGVPWGDRARVVGAQIRSRFRVGVAP              ASEAVRQWTERVR
Sbjct: 1   MAPMAGGGGVPWGDRARVVGAQIRSRFRVGVAPVDRRWLWRRGDGRVASEAVRQWTERVR 60

Query: 61  SLWQREKSTDQISSSPGTSQVAAAAKPSSSALRFYRKKVGKEVDGIEDSVIFRSLQALAV 120
           SLWQREKSTDQISSSPGTSQVAAAAKPSSSALRFYRKKVGKEVDGIEDSVIFRSLQALAV
Sbjct: 61  SLWQREKSTDQISSSPGTSQVAAAAKPSSSALRFYRKKVGKEVDGIEDSVIFRSLQALAV 120

Query: 121 PLIGNACHIFMHGLNSVQIYGAEKLQQALQERPKGKPLLTVSNHVAAMDDPFVIASILPP 180
           PLIGNACHIFMHGLNSVQIYGAEKLQQALQERPKGKPLLTVSNHVAAMDDPFVIASILPP
Sbjct: 121 PLIGNACHIFMHGLNSVQIYGAEKLQQALQERPKGKPLLTVSNHVAAMDDPFVIASILPP 180

Query: 181 SVMLEAQKLRWTLCASDRCFTNPILSTFFRSVKVLPVSRGDGIYQKGMDMALSKLNNGGW 240
           SVMLEAQKLRWTLCASDRCFTNPILSTFFRSVKVLPVSRGDGIYQKGMDMALSKLNNGGW
Sbjct: 181 SVMLEAQKLRWTLCASDRCFTNPILSTFFRSVKVLPVSRGDGIYQKGMDMALSKLNNGGW 240

Query: 241 VHIFPEGSRSKDGGKTVAPAKRGVGRLVMDADSLPVVIPFVHTGMQDIMPVGKRIPRAGK 300
           VHIFPEGSRSKDGGKTVAPAKRGVGRLVMDADSLPVVIPFVHTGMQDIMPVGKRIPRAGK
Sbjct: 241 VHIFPEGSRSKDGGKTVAPAKRGVGRLVMDADSLPVVIPFVHTGMQDIMPVGKRIPRAGK 300

Query: 301 RVIVVVGDPINFNDLIIDNSDETQHISRGILYDKATERIGQRLQELKAEVDRLAAEQKSE 360
           RVIVVVGDPINFNDLIIDNSDETQHISRGILYDKATERIGQRLQELKAEVDRLAAEQKSE
Sbjct: 301 RVIVVVGDPINFNDLIIDNSDETQHISRGILYDKATERIGQRLQELKAEVDRLAAEQKSE 360

Query: 361 LQHHHARDTVNYGTRLWQQVDWEAFGMESSMLSPEPSDVQEPLKKAKPVLHLESEHAKPE 420
           LQHHHARDTVNYGTRLWQQVDWEAFGMESSMLSPEPSDVQEPLKKAKPVLHLESEHAKPE
Sbjct: 361 LQHHHARDTVNYGTRLWQQVDWEAFGMESSMLSPEPSDVQEPLKKAKPVLHLESEHAKPE 420

Query: 421 LHLEPEQAKHELHTEQCVPAAPSAEICSNFGVPLFFRQHTDPSELMGFAARGLLKNGRFM 480
           LHLEPEQAKHELHTEQCVPAAPSAEICSNFGVPLFFRQHTDPSELMGFAARGLLKNGRFM
Sbjct: 421 LHLEPEQAKHELHTEQCVPAAPSAEICSNFGVPLFFRQHTDPSELMGFAARGLLKNGRFM 480

Query: 481 EEEGYRELQRQGAMNMFWGSQANNTVL 507
           EEEGYRELQRQGAMNMFWGSQANNTVL
Sbjct: 481 EEEGYRELQRQGAMNMFWGSQANNTVL 507



>Os04g0667000 Tafazzin family protein
          Length = 157

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%)

Query: 134 LNSVQIYGAEKLQQALQERPKGKPLLTVSNHVAAMDDPFVIASILPPSVMLEAQKLRWTL 193
           LN+  ++ A+ L + +  RP G PLLTVSNH++ MDDP +      P+   +A+  RW L
Sbjct: 51  LNTTTVHNADALLRLVSSRPPGTPLLTVSNHMSTMDDPLMWGFKGFPTT--DAKLQRWVL 108

Query: 194 CASDRCFTNPILSTFFRSVKVLPVSRGDGIYQKGMDMALSKLNNGGW 240
            A D CF N  +S  FR  K +P++RG GIYQ  M  AL  L+ G W
Sbjct: 109 TAEDICFRNVFMSYIFRLGKCVPITRGAGIYQDHMTEALEVLSTGDW 155



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,890,155
Number of extensions: 785421
Number of successful extensions: 2207
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2204
Number of HSP's successfully gapped: 2
Length of query: 507
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 402
Effective length of database: 11,553,331
Effective search space: 4644439062
Effective search space used: 4644439062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)