BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0859400 Os01g0859400|AK101903
         (259 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0859400  Dual specificity protein phosphatase domain co...   531   e-151
Os12g0497833                                                      178   3e-45

>Os01g0859400 Dual specificity protein phosphatase domain containing protein
          Length = 259

 Score =  531 bits (1369), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MGWGISRLIGLKAAVFLSVAYFFHRLDMTLLSFPLIYASVIAMLVSIASHPSIDLPLLLG 60
           MGWGISRLIGLKAAVFLSVAYFFHRLDMTLLSFPLIYASVIAMLVSIASHPSIDLPLLLG
Sbjct: 1   MGWGISRLIGLKAAVFLSVAYFFHRLDMTLLSFPLIYASVIAMLVSIASHPSIDLPLLLG 60

Query: 61  KGSNGSFPVWSWIMFSPFLLFIHLFVLLRRFVKNEPLYTEIADGVYVGGWPSSVERLPPG 120
           KGSNGSFPVWSWIMFSPFLLFIHLFVLLRRFVKNEPLYTEIADGVYVGGWPSSVERLPPG
Sbjct: 61  KGSNGSFPVWSWIMFSPFLLFIHLFVLLRRFVKNEPLYTEIADGVYVGGWPSSVERLPPG 120

Query: 121 EPAVIDCTCELPRSSTISENSYLCVATWDTRAPQPSQIESAVRWALRKRSQNKAVYVHCA 180
           EPAVIDCTCELPRSSTISENSYLCVATWDTRAPQPSQIESAVRWALRKRSQNKAVYVHCA
Sbjct: 121 EPAVIDCTCELPRSSTISENSYLCVATWDTRAPQPSQIESAVRWALRKRSQNKAVYVHCA 180

Query: 181 YGHGRSVCVMCALLVALGLAEDWKAAEQMIREKRPSISMNSLHRKSLEEWAKHLLTPSKR 240
           YGHGRSVCVMCALLVALGLAEDWKAAEQMIREKRPSISMNSLHRKSLEEWAKHLLTPSKR
Sbjct: 181 YGHGRSVCVMCALLVALGLAEDWKAAEQMIREKRPSISMNSLHRKSLEEWAKHLLTPSKR 240

Query: 241 SGESDVSYAILSDHTRKRH 259
           SGESDVSYAILSDHTRKRH
Sbjct: 241 SGESDVSYAILSDHTRKRH 259



>Os12g0497833 
          Length = 307

 Score =  178 bits (452), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 106/144 (73%), Gaps = 1/144 (0%)

Query: 39  SVIAMLVSIASHPSIDLPLLLGKGSNGSFPVWSWIMFSPFLLFIHLFVLLRRFV-KNEPL 97
           S IA ++++ASH SI++P +LGK S G FP+WS ++F PFL+   ++  ++R + K E +
Sbjct: 113 STIAYIIAVASHNSINIPWMLGKNSKGRFPIWSSVLFGPFLILARVYATMKRHMRKKEAV 172

Query: 98  YTEIADGVYVGGWPSSVERLPPGEPAVIDCTCELPRSSTISENSYLCVATWDTRAPQPSQ 157
           Y  I +GVY+GGWP  ++ LPPG+P+VIDCTCELPRS  +  N YLCV TWDTRAP  SQ
Sbjct: 173 YNMITEGVYLGGWPFMLKHLPPGDPSVIDCTCELPRSDFVPTNEYLCVPTWDTRAPTISQ 232

Query: 158 IESAVRWALRKRSQNKAVYVHCAY 181
           IE A RWA  KR++ K VYVHCA+
Sbjct: 233 IEFAARWACEKRAKGKPVYVHCAF 256



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,414,734
Number of extensions: 393921
Number of successful extensions: 1210
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1209
Number of HSP's successfully gapped: 2
Length of query: 259
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 160
Effective length of database: 11,866,615
Effective search space: 1898658400
Effective search space used: 1898658400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 155 (64.3 bits)