Os01g0859400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dual specificity protein phosphatase domain containing protein.
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Os01g0859400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dual specificity protein phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.44 | 0.421 | 4.68 | -0.373 | 0.296 | 1.15 | -0.159 | -0.212 | 0.00776 | 9.59 | 24.68 | 4392 | -- | -- |
| 80.48 | 0.418 | 4.68 | -0.423 | 0.292 | 1.15 | -0.138 | -- | 0.00162 | 9.62 | 24.6 | 4391 | -- | -- |
| 80.5 | 0.418 | 4.68 | -0.384 | 0.296 | 1.14 | -- | -0.19 | 0.00118 | 9.85 | 24.65 | 4401 | -- | -- |
| 80.02 | 0.417 | 4.68 | -0.416 | 0.24 | 1.1 | -- | -- | 0.00609 | 9.67 | 24.6 | 5252 | -- | -- |
| 83.89 | 0.427 | 4.68 | -0.399 | -- | 1.19 | -- | -0.154 | 0.0551 | -- | 24.68 | 3730 | -- | -- |
| 113.38 | 0.499 | 4.75 | -0.895 | 0.331 | -- | 0.0236 | -- | -0.274 | 10.7 | -- | -- | -- | -- |
| 113.38 | 0.499 | 4.75 | -0.894 | 0.331 | -- | -- | -- | -0.274 | 10.7 | -- | -- | -- | -- |
| 83.53 | 0.426 | 4.69 | -0.406 | -- | 1.12 | -- | -- | 0.00381 | -- | 24.64 | 5232 | -- | -- |
| 83.68 | 0.426 | 4.67 | -- | 0.251 | 1.18 | -- | -- | 0.0871 | 10.1 | 24.2 | 5167 | -- | -- |
| 120.15 | 0.512 | 4.75 | -0.9 | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
| 134.44 | 0.542 | 4.72 | -- | 0.338 | -- | -- | -- | -0.175 | 10.9 | -- | -- | -- | -- |
| 87.23 | 0.435 | 4.67 | -- | -- | 1.26 | -- | -- | 0.0765 | -- | 24.63 | 5232 | -- | -- |
| 141.53 | 0.555 | 4.73 | -- | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.15 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 5 | 76.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 21 | 77.41 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 22 | 77.43 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 24 | 77.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 27 | 77.60 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 30 | 77.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 35 | 77.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 5 |
| 44 | 77.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 52 | 77.89 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 55 | 77.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 66 | 77.97 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 92 | 78.16 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 126 | 78.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 163 | 78.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 18 |
| 185 | 78.83 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 18 |
| 193 | 78.85 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 196 | 78.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 282 | 79.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 293 | 79.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 294 | 79.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 326 | 79.43 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 363 | 79.54 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 711 | 80.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 823 | 80.75 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 830 | 80.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 23 |
| 846 | 80.79 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 909 | 80.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 23 |
| 910 | 80.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 911 | 80.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 923 | 80.92 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |