BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0836900 Os01g0836900|AK064231
         (364 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0836900  Conserved hypothetical protein                      570   e-163
Os05g0462200                                                      283   1e-76

>Os01g0836900 Conserved hypothetical protein
          Length = 364

 Score =  570 bits (1469), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/364 (78%), Positives = 285/364 (78%)

Query: 1   MARHGPQSHDQPLQEEDYIDMDLXXXXXXXXXXXXXXXXLLCYSTAMAASPQNSREFEFH 60
           MARHGPQSHDQPLQEEDYIDMDL                LLCYSTAMAASPQNSREFEFH
Sbjct: 1   MARHGPQSHDQPLQEEDYIDMDLSSPAAAEAVTASARASLLCYSTAMAASPQNSREFEFH 60

Query: 61  MSAPVDKWEPAASPADELFYKGKLLPLHLPPRIQMVEKLLESAAEKGLLSASTAPATPYQ 120
           MSAPVDKWEPAASPADELFYKGKLLPLHLPPRIQMVEKLLESAAEKGLLSASTAPATPYQ
Sbjct: 61  MSAPVDKWEPAASPADELFYKGKLLPLHLPPRIQMVEKLLESAAEKGLLSASTAPATPYQ 120

Query: 121 SCNASPANSCYVSGELNAEHYFHECTSXXXXXXXXXXXCEKKPWSKKLKFIRHLNLGLKL 180
           SCNASPANSCYVSGELNAEHYFHECTS           CEKKPWSKKLKFIRHLNLGLKL
Sbjct: 121 SCNASPANSCYVSGELNAEHYFHECTSAGIGAAEEAAACEKKPWSKKLKFIRHLNLGLKL 180

Query: 181 KASKAYIKTIFATKAGNPDGKTGTPSANELSNAQFKSWRKNPFGQIRSNRYIASPISNSV 240
           KASKAYIKTIFATKAGNPDGKTGTPSANELSNAQFKSWRKNPFGQIRSNRYIASPISNSV
Sbjct: 181 KASKAYIKTIFATKAGNPDGKTGTPSANELSNAQFKSWRKNPFGQIRSNRYIASPISNSV 240

Query: 241 TLGGRLKEDECGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGPVLR 300
           TLGGRLKEDECGH                                        GVGPVLR
Sbjct: 241 TLGGRLKEDECGHRRSFSSVIIRYSSSNKTSSASSSSCSSSNSSSSILSSTDSGVGPVLR 300

Query: 301 RSSSASSEMDNPIQGAIAYCKRSQQLASVRKSASDAGFRFMXXXXXXXXXXXXDPDDIIE 360
           RSSSASSEMDNPIQGAIAYCKRSQQLASVRKSASDAGFRFM            DPDDIIE
Sbjct: 301 RSSSASSEMDNPIQGAIAYCKRSQQLASVRKSASDAGFRFMSSSASRIAAESEDPDDIIE 360

Query: 361 ICGR 364
           ICGR
Sbjct: 361 ICGR 364



>Os05g0462200 
          Length = 369

 Score =  283 bits (725), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 182/379 (48%), Positives = 213/379 (56%), Gaps = 49/379 (12%)

Query: 11  QPLQEEDYIDMDLXXXXXXXXXXXXXXXXLLCYSTAMAASPQNSREFEFHMSAPVD---- 66
           + +QEEDYIDMDL                    ++A AA+     EF+FHMS P+     
Sbjct: 11  EAMQEEDYIDMDL--------------------TSAAAATAPGEFEFDFHMSGPLGGGGA 50

Query: 67  KWE--PAASPADELFYKGKLLPLHLPPRIQMVEKLLES-----AAEKGLLSASTAPATPY 119
           +WE  P ASPADELFYKGKLLPLHLPPRIQMVE+LL+       A +  L+ STAPATPY
Sbjct: 51  RWEQEPLASPADELFYKGKLLPLHLPPRIQMVEELLDGRVVVGGAGRRQLAISTAPATPY 110

Query: 120 QSCNASPANSCYVSGELNAEHYFHECTSXXXXXXXXXXXCEKKPWSKKLKFIRHLNLGLK 179
            SC ASPANSCY SGELN E YF E  +           CEKKPWS+KL+F+R LNLGLK
Sbjct: 111 DSCTASPANSCYASGELNVEEYFQEYAARLADAAAAA--CEKKPWSRKLRFMRQLNLGLK 168

Query: 180 LKASKAYIKTIFATK---AGNPDGKT----GTPSANELSNA---QFKSWRKNPFGQIRSN 229
           LKASKAYIKTIFA K   +G+ D K      T    ELS+      ++WR+NPFGQ+RSN
Sbjct: 169 LKASKAYIKTIFAAKPASSGDDDDKDAILGATRETKELSHGGHHHHRAWRRNPFGQMRSN 228

Query: 230 RYIASPISNSVTLGGRL----KEDECGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 285
           R IAS  S             + D  GH                                
Sbjct: 229 RCIASSQSGGGRGSVGGGKHKERDHGGHRRSFSSVIVRYSTSNKTSPAPQSSSCSSSSSV 288

Query: 286 XXXXXXXXG-VGPVLRRSSSASSEMDNPIQGAIAYCKRSQQLASVRKSASDAGFRFMXXX 344
                   G   P LRRSSSASSE++NPIQG IAYCKRSQQLASVRKSASDAGFRF+   
Sbjct: 289 RTSSESDGGAAAPALRRSSSASSEVENPIQGLIAYCKRSQQLASVRKSASDAGFRFLSSA 348

Query: 345 XXXXXXXXXD-PDDIIEIC 362
                    D P++++EIC
Sbjct: 349 ASKIAAAESDGPEELVEIC 367



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,145,848
Number of extensions: 352846
Number of successful extensions: 790
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 783
Number of HSP's successfully gapped: 5
Length of query: 364
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 262
Effective length of database: 11,709,973
Effective search space: 3068012926
Effective search space used: 3068012926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)