Os01g0836900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0836900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.41 | 0.276 | 3.22 | 0.153 | 0.194 | 0.241 | -0.05 | 0.997 | -0.0431 | 7.14 | 91.99 | 4832 | -- | -- |
| 35.84 | 0.279 | 3.21 | 0.0922 | 0.17 | 0.239 | -0.168 | -- | -0.0649 | 6.86 | 93.01 | 7289 | -- | -- |
| 34.41 | 0.273 | 3.21 | 0.151 | 0.196 | 0.242 | -- | 1.02 | -0.0431 | 7.22 | 91.03 | 4855 | -- | -- |
| 35.76 | 0.279 | 3.21 | 0.0767 | 0.162 | 0.276 | -- | -- | -0.0658 | 7.32 | 198.5 | 4318 | -- | -- |
| 35.72 | 0.278 | 3.22 | 0.163 | -- | 0.206 | -- | 1.09 | -0.0283 | -- | 90.9 | 5849 | -- | -- |
| 36.68 | 0.284 | 3.2 | 0.0683 | 0.166 | -- | -0.18 | -- | -0.00823 | 6.95 | -- | -- | -- | -- |
| 36.75 | 0.284 | 3.2 | 0.0655 | 0.166 | -- | -- | -- | -0.00749 | 7.29 | -- | -- | -- | -- |
| 37.22 | 0.284 | 3.22 | 0.0816 | -- | 0.282 | -- | -- | -0.0634 | -- | 285.2 | 4290 | -- | -- |
| 35.92 | 0.279 | 3.22 | -- | 0.165 | 0.275 | -- | -- | -0.0742 | 7.18 | 201.8 | 4327 | -- | -- |
| 38.2 | 0.289 | 3.2 | 0.0684 | -- | -- | -- | -- | -0.0047 | -- | -- | -- | -- | -- |
| 36.86 | 0.284 | 3.2 | -- | 0.166 | -- | -- | -- | -0.0148 | 7.26 | -- | -- | -- | -- |
| 37.39 | 0.285 | 3.22 | -- | -- | 0.274 | -- | -- | -0.0708 | -- | 201.3 | 4288 | -- | -- |
| 38.33 | 0.289 | 3.21 | -- | -- | -- | -- | -- | -0.0123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.47 | radiation | 10 | 30 | > th | dose independent | rect. | 7 | 1 |
| 2 | 33.49 | humidity | 80 | 10 | < th | dose independent | rect. | 7 | 1 |
| 4 | 33.50 | humidity | 90 | 90 | < th | dose independent | rect. | 2 | 6 |
| 21 | 33.65 | humidity | 80 | 10 | < th | dose independent | rect. | 23 | 9 |
| 26 | 33.70 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 29 | 33.72 | humidity | 90 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 55 | 34.02 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 11 |
| 65 | 34.09 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 66 | 34.09 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 67 | 34.09 | humidity | 70 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 69 | 34.09 | humidity | 70 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 100 | 34.16 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 102 | 34.20 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 119 | 34.24 | humidity | 80 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 124 | 34.25 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 126 | 34.25 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 161 | 34.30 | humidity | 70 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 164 | 34.30 | humidity | 50 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 165 | 34.30 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 169 | 34.31 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 8 | 11 |
| 192 | 34.32 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 202 | 34.32 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 218 | 34.33 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 231 | 34.34 | humidity | 70 | 4320 | > th | dose independent | sin | 4 | NA |
| 247 | 34.34 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 294 | 34.36 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 300 | 34.37 | wind | 7 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 313 | 34.37 | humidity | 90 | 4320 | < th | dose dependent | sin | 5 | NA |
| 356 | 34.38 | humidity | 80 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 422 | 34.39 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 507 | 34.41 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 8 | 22 |
| 536 | 34.42 | humidity | 70 | 4320 | < th | dose independent | sin | 4 | NA |
| 610 | 34.44 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 21 | 14 |
| 669 | 34.45 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 804 | 34.48 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 840 | 34.49 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 896 | 34.50 | atmosphere | 995 | 30 | > th | dose independent | rect. | 21 | 23 |
| 920 | 34.51 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |