BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0593000 Os01g0593000|Os01g0593000
         (2485 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0593000  Conserved hypothetical protein                     4592   0.0  

>Os01g0593000 Conserved hypothetical protein
          Length = 2485

 Score = 4592 bits (11911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 2247/2469 (91%), Positives = 2247/2469 (91%)

Query: 17   NHLYLGQFEXXXXXXXXXXXXXDPXXXXXXXXXXXXXXXXXXXXXWSAPPACPSPSHXXX 76
            NHLYLGQFE             DP                     WSAPPACPSPSH   
Sbjct: 17   NHLYLGQFEALRAALLSLRRRADPGLAAGFLRAVVAAGGRVPGVLWSAPPACPSPSHLAW 76

Query: 77   XXXXXXXXXPSTPNPEALRLKAEFLVLLQHVADDPAATGAEARGTLSRLLDLGVARLKRX 136
                     PSTPNPEALRLKAEFLVLLQHVADDPAATGAEARGTLSRLLDLGVARLKR 
Sbjct: 77   LTALELAALPSTPNPEALRLKAEFLVLLQHVADDPAATGAEARGTLSRLLDLGVARLKRE 136

Query: 137  XXXXXXXXXXXXXXXXSQEDLTGLWGVFLDKAELFDALCSGVSRQVALDSGLGTDVLLWL 196
                            SQEDLTGLWGVFLDKAELFDALCSGVSRQVALDSGLGTDVLLWL
Sbjct: 137  VEGGGEAGVGAEEVAVSQEDLTGLWGVFLDKAELFDALCSGVSRQVALDSGLGTDVLLWL 196

Query: 197  RRSVQLAHLDAMKSLVAAGDLEGATGHLRFLCLDHGVEEDEYKIALGDLVRRGWPKPSNY 256
            RRSVQLAHLDAMKSLVAAGDLEGATGHLRFLCLDHGVEEDEYKIALGDLVRRGWPKPSNY
Sbjct: 197  RRSVQLAHLDAMKSLVAAGDLEGATGHLRFLCLDHGVEEDEYKIALGDLVRRGWPKPSNY 256

Query: 257  GGTWFESHDRIIKMFGSALQSSTPXXXXXXXXXXXXXXXXXXXXHGASDANWMPLPFKKF 316
            GGTWFESHDRIIKMFGSALQSSTP                    HGASDANWMPLPFKKF
Sbjct: 257  GGTWFESHDRIIKMFGSALQSSTPQLVQLIQLILDDILSEEIEDHGASDANWMPLPFKKF 316

Query: 317  METLSLERGAYLDDKTMLNRAITSCKKDLYHYSRISGKHVLEVVMETVLSLIKREQLQEA 376
            METLSLERGAYLDDKTMLNRAITSCKKDLYHYSRISGKHVLEVVMETVLSLIKREQLQEA
Sbjct: 317  METLSLERGAYLDDKTMLNRAITSCKKDLYHYSRISGKHVLEVVMETVLSLIKREQLQEA 376

Query: 377  ANAISMFPLLQPLVAVLGWDILKGKTALRRKLLQLFWTSKSQALRLQEYPHYRTETDETS 436
            ANAISMFPLLQPLVAVLGWDILKGKTALRRKLLQLFWTSKSQALRLQEYPHYRTETDETS
Sbjct: 377  ANAISMFPLLQPLVAVLGWDILKGKTALRRKLLQLFWTSKSQALRLQEYPHYRTETDETS 436

Query: 437  CEEYLCDLLCFHLDVACFVSSVNSGRQWNLRNSLLFTQQEQDSDVNSTEILDPFVENLIL 496
            CEEYLCDLLCFHLDVACFVSSVNSGRQWNLRNSLLFTQQEQDSDVNSTEILDPFVENLIL
Sbjct: 437  CEEYLCDLLCFHLDVACFVSSVNSGRQWNLRNSLLFTQQEQDSDVNSTEILDPFVENLIL 496

Query: 497  ERLAVQTPIRVLFDVVPGIKFQDAIELVGMQPLSSTTAIWKRMHDIELMHMRYALQSAAL 556
            ERLAVQTPIRVLFDVVPGIKFQDAIELVGMQPLSSTTAIWKRMHDIELMHMRYALQSAAL
Sbjct: 497  ERLAVQTPIRVLFDVVPGIKFQDAIELVGMQPLSSTTAIWKRMHDIELMHMRYALQSAAL 556

Query: 557  SLGEMEKSAIDGNEHHYQIALSYLREMQSFMEAIKSTPRKIYMVSIVLSLLHMDDSIKLS 616
            SLGEMEKSAIDGNEHHYQIALSYLREMQSFMEAIKSTPRKIYMVSIVLSLLHMDDSIKLS
Sbjct: 557  SLGEMEKSAIDGNEHHYQIALSYLREMQSFMEAIKSTPRKIYMVSIVLSLLHMDDSIKLS 616

Query: 617  EVAPSECSVSHECFDSNVESEEKNMVTSFVGLLLDILRHNLMLDMDNQSSMGLSPAGRQA 676
            EVAPSECSVSHECFDSNVESEEKNMVTSFVGLLLDILRHNLMLDMDNQSSMGLSPAGRQA
Sbjct: 617  EVAPSECSVSHECFDSNVESEEKNMVTSFVGLLLDILRHNLMLDMDNQSSMGLSPAGRQA 676

Query: 677  LEWRFKHAKHSIEDLDWRLSVLQRLPPLSERQWSWKEALVLLRAAPSKLLNVCMQRANYD 736
            LEWRFKHAKHSIEDLDWRLSVLQRLPPLSERQWSWKEALVLLRAAPSKLLNVCMQRANYD
Sbjct: 677  LEWRFKHAKHSIEDLDWRLSVLQRLPPLSERQWSWKEALVLLRAAPSKLLNVCMQRANYD 736

Query: 737  IGEEAVQRFSLPAEDKASLELAEWVAGAYRIALVEDAVNRATDNSNATQELDILSFRAQL 796
            IGEEAVQRFSLPAEDKASLELAEWVAGAYRIALVEDAVNRATDNSNATQELDILSFRAQL
Sbjct: 737  IGEEAVQRFSLPAEDKASLELAEWVAGAYRIALVEDAVNRATDNSNATQELDILSFRAQL 796

Query: 797  GPLTTILLCIDVAATSARSGDMCRFLLDEDLDHAIADHWRSLSPGHNLMKALHYCHVDPG 856
            GPLTTILLCIDVAATSARSGDMCRFLLDEDLDHAIADHWRSLSPGHNLMKALHYCHVDPG
Sbjct: 797  GPLTTILLCIDVAATSARSGDMCRFLLDEDLDHAIADHWRSLSPGHNLMKALHYCHVDPG 856

Query: 857  NGHMMTNTCRTFAVLARPCHIGEEGSKWKISGGSSPKVGPNYWDQIQEVALISVIKXXXX 916
            NGHMMTNTCRTFAVLARPCHIGEEGSKWKISGGSSPKVGPNYWDQIQEVALISVIK    
Sbjct: 857  NGHMMTNTCRTFAVLARPCHIGEEGSKWKISGGSSPKVGPNYWDQIQEVALISVIKRILQ 916

Query: 917  XXXXXXXXEGYPYLQLVFTEMNASSSTESSRVGQKQRPLGLLHQMIDDAFKGKRQFLNGK 976
                    EGYPYLQLVFTEMNASSSTESSRVGQKQRPLGLLHQMIDDAFKGKRQFLNGK
Sbjct: 917  RLRDILDLEGYPYLQLVFTEMNASSSTESSRVGQKQRPLGLLHQMIDDAFKGKRQFLNGK 976

Query: 977  LHNVARAIVDEDSDGTYSKESIKIEKRDILSSEKGIILGHGLRILKQASRTDQTASTVVE 1036
            LHNVARAIVDEDSDGTYSKESIKIEKRDILSSEKGIILGHGLRILKQASRTDQTASTVVE
Sbjct: 977  LHNVARAIVDEDSDGTYSKESIKIEKRDILSSEKGIILGHGLRILKQASRTDQTASTVVE 1036

Query: 1037 NNAEHKGSTSRYLGPVSTKPSTYLSNFIIYIAXXXXXXXXXXXXXXFNYFSLVYERPKDL 1096
            NNAEHKGSTSRYLGPVSTKPSTYLSNFIIYIA              FNYFSLVYERPKDL
Sbjct: 1037 NNAEHKGSTSRYLGPVSTKPSTYLSNFIIYIATIGDIVDGTDTTHDFNYFSLVYERPKDL 1096

Query: 1097 LTRLVFERGSTDAAAKVADTMGVDFVHEIISACVPPVFPPRTGQGWACIPLLPTLSKINS 1156
            LTRLVFERGSTDAAAKVADTMGVDFVHEIISACVPPVFPPRTGQGWACIPLLPTLSKINS
Sbjct: 1097 LTRLVFERGSTDAAAKVADTMGVDFVHEIISACVPPVFPPRTGQGWACIPLLPTLSKINS 1156

Query: 1157 ENRSQSAQGWSAHDSSLSSRQEPLYPLQLNLVKHLAQLSSVRAVLACVFGSSILSGDSEL 1216
            ENRSQSAQGWSAHDSSLSSRQEPLYPLQLNLVKHLAQLSSVRAVLACVFGSSILSGDSEL
Sbjct: 1157 ENRSQSAQGWSAHDSSLSSRQEPLYPLQLNLVKHLAQLSSVRAVLACVFGSSILSGDSEL 1216

Query: 1217 CSNVKDAKQAPEIKRSFYEFALEQSERYPTLNRWIQMQCNLHRVSESAVSAETDNEVTLH 1276
            CSNVKDAKQAPEIKRSFYEFALEQSERYPTLNRWIQMQCNLHRVSESAVSAETDNEVTLH
Sbjct: 1217 CSNVKDAKQAPEIKRSFYEFALEQSERYPTLNRWIQMQCNLHRVSESAVSAETDNEVTLH 1276

Query: 1277 QPKGKFSSKRAREPDSDAESEIEDIVISGKSTSNSLESPKCDEAKLEPTTFISFDWDNEG 1336
            QPKGKFSSKRAREPDSDAESEIEDIVISGKSTSNSLESPKCDEAKLEPTTFISFDWDNEG
Sbjct: 1277 QPKGKFSSKRAREPDSDAESEIEDIVISGKSTSNSLESPKCDEAKLEPTTFISFDWDNEG 1336

Query: 1337 PYEKAVERLINEGKLTDALALSDRCLRNGASDKXXXXXXXXXXXXXXGARQSRAYGSHNF 1396
            PYEKAVERLINEGKLTDALALSDRCLRNGASDK              GARQSRAYGSHNF
Sbjct: 1337 PYEKAVERLINEGKLTDALALSDRCLRNGASDKLLQLLIEQREEISLGARQSRAYGSHNF 1396

Query: 1397 GSDTWQYCXXXXXXXXXXXXXXXXXHNWDLDAAANVLTLCICHLPENDPMWSEVLRMKQS 1456
            GSDTWQYC                 HNWDLDAAANVLTLCICHLPENDPMWSEVLRMKQS
Sbjct: 1397 GSDTWQYCLRLRDKKLAAQLALKYLHNWDLDAAANVLTLCICHLPENDPMWSEVLRMKQS 1456

Query: 1457 LQRYGHIMTADDHYTRWQEVEVDCEDDPEGLALRLAAKGXXXXXXXXXXXXXXXIDLRRE 1516
            LQRYGHIMTADDHYTRWQEVEVDCEDDPEGLALRLAAKG               IDLRRE
Sbjct: 1457 LQRYGHIMTADDHYTRWQEVEVDCEDDPEGLALRLAAKGAVSAALEVAESASLSIDLRRE 1516

Query: 1517 LQGRQLVKLLTTDPLNGGGPAAASRFLSTLRDSNDALPVAIGAMKLLPDLRSKQLLVHFF 1576
            LQGRQLVKLLTTDPLNGGGPAAASRFLSTLRDSNDALPVAIGAMKLLPDLRSKQLLVHFF
Sbjct: 1517 LQGRQLVKLLTTDPLNGGGPAAASRFLSTLRDSNDALPVAIGAMKLLPDLRSKQLLVHFF 1576

Query: 1577 LKRTVGNLSDDDVARLNSWAXXXXXXXXXXXXXXXXXXXXHEHPQLILEVLLMMKQLQSA 1636
            LKRTVGNLSDDDVARLNSWA                    HEHPQLILEVLLMMKQLQSA
Sbjct: 1577 LKRTVGNLSDDDVARLNSWALGLRVLSLLPLPSQQRCSSLHEHPQLILEVLLMMKQLQSA 1636

Query: 1637 SLILKEFPSLRDDKLIVTYAKKAISINVNSTPREPRLTISGSRAKQKKVAAPAKTNFVQS 1696
            SLILKEFPSLRDDKLIVTYAKKAISINVNSTPREPRLTISGSRAKQKKVAAPAKTNFVQS
Sbjct: 1637 SLILKEFPSLRDDKLIVTYAKKAISINVNSTPREPRLTISGSRAKQKKVAAPAKTNFVQS 1696

Query: 1697 FGNFQREARKAFSWVPRDSGTKTPPKDILXXXXXXXXXXXXXXWEATPSVQEERAPEYPS 1756
            FGNFQREARKAFSWVPRDSGTKTPPKDIL              WEATPSVQEERAPEYPS
Sbjct: 1697 FGNFQREARKAFSWVPRDSGTKTPPKDILRKRKSSGSGGERSSWEATPSVQEERAPEYPS 1756

Query: 1757 EGQERLPFVSAPEEWVLTGDPDKDNATRACHRYESSPDITLFKALLSLCTNDSIAGKGAL 1816
            EGQERLPFVSAPEEWVLTGDPDKDNATRACHRYESSPDITLFKALLSLCTNDSIAGKGAL
Sbjct: 1757 EGQERLPFVSAPEEWVLTGDPDKDNATRACHRYESSPDITLFKALLSLCTNDSIAGKGAL 1816

Query: 1817 EICITQMRDVLSSLQLPLNASMDNIARAYHATETYVQALSYAKNLLKKLVGTXXXXXXXX 1876
            EICITQMRDVLSSLQLPLNASMDNIARAYHATETYVQALSYAKNLLKKLVGT        
Sbjct: 1817 EICITQMRDVLSSLQLPLNASMDNIARAYHATETYVQALSYAKNLLKKLVGTSDLSSSSE 1876

Query: 1877 XXXXXXXXXXXTGSSSAGSQNIXXXXXXXXXXXXXXGRAELLQSLLGSGIIASLDDFADK 1936
                       TGSSSAGSQNI              GRAELLQSLLGSGIIASLDDFADK
Sbjct: 1877 RSRDVDDISVDTGSSSAGSQNIDGLSDLLPLADLWLGRAELLQSLLGSGIIASLDDFADK 1936

Query: 1937 ESSTNLRDRLVSDERYSMAVYTCKKCKIDAFPVWVAWGHALVRMEHYSQARVKFKYGKLC 1996
            ESSTNLRDRLVSDERYSMAVYTCKKCKIDAFPVWVAWGHALVRMEHYSQARVKFKYGKLC
Sbjct: 1937 ESSTNLRDRLVSDERYSMAVYTCKKCKIDAFPVWVAWGHALVRMEHYSQARVKFKYGKLC 1996

Query: 1997 LQALQQYKGDATHFVLEIISTIEGGPPVDVSSVRSMYEHLAKSAATIFDDSLSADAYLNV 2056
            LQALQQYKGDATHFVLEIISTIEGGPPVDVSSVRSMYEHLAKSAATIFDDSLSADAYLNV
Sbjct: 1997 LQALQQYKGDATHFVLEIISTIEGGPPVDVSSVRSMYEHLAKSAATIFDDSLSADAYLNV 2056

Query: 2057 LYMPSTFPRSERSRQSKGPMDSQFESVGSYLEDGPRSNLDGIRYAECIHYLQEYARPEML 2116
            LYMPSTFPRSERSRQSKGPMDSQFESVGSYLEDGPRSNLDGIRYAECIHYLQEYARPEML
Sbjct: 2057 LYMPSTFPRSERSRQSKGPMDSQFESVGSYLEDGPRSNLDGIRYAECIHYLQEYARPEML 2116

Query: 2117 AFMFRHGHYAEACSLFFPSNQPTDEGETSLSSIPRNDPLTTDYGTIDDLCDLCLGYGAMT 2176
            AFMFRHGHYAEACSLFFPSNQPTDEGETSLSSIPRNDPLTTDYGTIDDLCDLCLGYGAMT
Sbjct: 2117 AFMFRHGHYAEACSLFFPSNQPTDEGETSLSSIPRNDPLTTDYGTIDDLCDLCLGYGAMT 2176

Query: 2177 VLENTILTITQSPTYQGSAMTQYMNAILTRICNYCETHRHFNYLYNFLVLKGDHVASGLC 2236
            VLENTILTITQSPTYQGSAMTQYMNAILTRICNYCETHRHFNYLYNFLVLKGDHVASGLC
Sbjct: 2177 VLENTILTITQSPTYQGSAMTQYMNAILTRICNYCETHRHFNYLYNFLVLKGDHVASGLC 2236

Query: 2237 CIQLYVNSMSQEEALKHLGHAKSHFEEALSVRDRTTEATKLVPRTARNKSASEKMTREMI 2296
            CIQLYVNSMSQEEALKHLGHAKSHFEEALSVRDRTTEATKLVPRTARNKSASEKMTREMI
Sbjct: 2237 CIQLYVNSMSQEEALKHLGHAKSHFEEALSVRDRTTEATKLVPRTARNKSASEKMTREMI 2296

Query: 2297 MKFSTRVSYQMDVVKALNSVDGPQWKTSLFGNPTDAETLRRRCMVVETLAEKHFDLAFRM 2356
            MKFSTRVSYQMDVVKALNSVDGPQWKTSLFGNPTDAETLRRRCMVVETLAEKHFDLAFRM
Sbjct: 2297 MKFSTRVSYQMDVVKALNSVDGPQWKTSLFGNPTDAETLRRRCMVVETLAEKHFDLAFRM 2356

Query: 2357 LHEFDLPAVDIYAGVAASLAERKKGGQLTEFLKNIRGTIDDDEWDQVLGAAINVYANKHK 2416
            LHEFDLPAVDIYAGVAASLAERKKGGQLTEFLKNIRGTIDDDEWDQVLGAAINVYANKHK
Sbjct: 2357 LHEFDLPAVDIYAGVAASLAERKKGGQLTEFLKNIRGTIDDDEWDQVLGAAINVYANKHK 2416

Query: 2417 ERPDRLIDMLLSNHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDM 2476
            ERPDRLIDMLLSNHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDM
Sbjct: 2417 ERPDRLIDMLLSNHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDM 2476

Query: 2477 CKQWLAQYM 2485
            CKQWLAQYM
Sbjct: 2477 CKQWLAQYM 2485



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 75,098,573
Number of extensions: 2943370
Number of successful extensions: 6977
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6969
Number of HSP's successfully gapped: 1
Length of query: 2485
Length of database: 17,035,801
Length adjustment: 117
Effective length of query: 2368
Effective length of database: 10,926,763
Effective search space: 25874574784
Effective search space used: 25874574784
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 165 (68.2 bits)