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Os01g0593000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.09 (0.0239) R2 : 0.21
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.939 (0.0676) R2dE : 0.111 R2E : -0.0618
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.408 (0.0526) R2dN8 : 0.271 R2N8 : 0.0981
σ : 0.424
deviance : 82.36
__
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C
peak time of C : --
E
wheather : temperature
threshold : 25.45
memory length : 7656
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.75 0.344 7.92 1.8 0.426 -1.4 -0.283 5.2 0.751 3.66 25.77 1742 -- --
59.08 0.358 8.03 0.711 0.523 -0.839 -0.18 -- 0.685 3.89 22.84 7667 -- --
53.98 0.342 7.92 1.83 0.426 -1.42 -- 5.35 0.749 3.71 25.88 1742 -- --
59.12 0.358 8.02 0.71 0.534 -0.845 -- -- 0.687 4.19 22.63 7567 -- --
63.5 0.371 7.9 2.06 -- -1.59 -- 6.47 0.788 -- 26.07 1790 -- --
84.86 0.432 8.08 0.316 0.531 -- -0.345 -- 0.397 4.35 -- -- -- --
85.17 0.432 8.08 0.319 0.53 -- -- -- 0.399 4.45 -- -- -- --
73.71 0.4 8.04 0.676 -- -0.825 -- -- 0.642 -- 25.45 7656 -- --
68.51 0.385 8.06 -- 0.539 -0.666 -- -- 0.527 4.3 26.31 7524 -- --
100.22 0.468 8.09 0.34 -- -- -- -- 0.413 -- -- -- -- --
87.86 0.438 8.09 -- 0.536 -- -- -- 0.363 4.43 -- -- -- --
82.36 0.424 8.09 -- -- -0.939 -- -- 0.408 -- 25.45 7656 -- --
103.27 0.474 8.1 -- -- -- -- -- 0.375 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.78 temperature 25 1440 > th dose dependent rect. 17 2
17 53.45 temperature 25 1440 > th dose dependent rect. 11 9
23 53.52 radiation 1 14400 > th dose independent rect. 18 11
24 53.54 radiation 1 14400 > th dose independent rect. 18 1
52 53.97 temperature 25 1440 > th dose dependent sin 18 NA
123 54.62 radiation 1 14400 < th dose independent rect. 18 11
137 54.73 radiation 1 14400 < th dose independent rect. 18 8
143 54.75 radiation 1 14400 < th dose independent rect. 18 4
169 54.84 humidity 90 14400 > th dose dependent rect. 19 7
193 54.94 humidity 90 14400 > th dose dependent rect. 18 9
228 55.12 humidity 90 14400 > th dose dependent rect. 21 4
241 55.18 temperature 30 1440 < th dose independent rect. 14 2
281 55.34 temperature 25 1440 > th dose dependent no NA NA
293 55.47 radiation 1 14400 > th dose independent rect. 5 1
304 55.54 humidity 80 14400 > th dose independent rect. 17 1
306 55.59 radiation 1 14400 < th dose independent rect. 5 1
316 55.66 wind 3 43200 > th dose dependent rect. 5 11
327 55.78 humidity 80 14400 < th dose independent rect. 14 5
330 55.79 humidity 80 14400 > th dose independent rect. 16 3
339 55.90 humidity 80 14400 < th dose independent rect. 16 2
345 55.95 humidity 90 14400 > th dose dependent sin 15 NA
356 56.03 wind 7 43200 < th dose dependent rect. 11 1
375 56.14 temperature 30 1440 > th dose independent rect. 14 2
391 56.24 humidity 80 43200 < th dose dependent rect. 22 1
392 56.26 humidity 80 43200 > th dose independent rect. 3 1
395 56.27 wind 1 43200 > th dose dependent rect. 6 8
413 56.34 humidity 80 43200 > th dose independent rect. 23 6
415 56.35 wind 9 43200 < th dose dependent rect. 5 10
417 56.36 humidity 80 43200 > th dose independent rect. 23 8
418 56.36 wind 3 43200 > th dose dependent sin 2 NA
423 56.37 wind 1 43200 > th dose dependent rect. 11 2
425 56.38 wind 9 43200 < th dose dependent rect. 3 12
432 56.42 wind 9 43200 < th dose dependent rect. 6 8
435 56.43 humidity 90 43200 > th dose independent rect. 22 1
451 56.49 humidity 80 43200 > th dose independent rect. 2 5
457 56.51 wind 3 43200 > th dose independent rect. 3 11
466 56.54 humidity 80 43200 < th dose independent rect. 3 4
490 56.62 humidity 80 43200 < th dose independent rect. 23 8
501 56.64 humidity 80 43200 > th dose independent rect. 24 1
509 56.68 humidity 80 43200 < th dose independent rect. 3 1
523 56.71 radiation 1 14400 < th dose dependent rect. 18 4
526 56.72 radiation 1 14400 < th dose dependent rect. 18 1
545 56.76 wind 3 43200 > th dose dependent rect. 6 1
547 56.77 humidity 80 43200 < th dose independent rect. 23 1
559 56.79 wind 9 43200 < th dose independent rect. 19 20
566 56.81 temperature 25 1440 > th dose independent rect. 18 4
590 56.86 wind 3 43200 > th dose independent rect. 8 5
591 56.86 wind 3 43200 < th dose independent rect. 3 11
595 56.88 temperature 30 14400 < th dose independent rect. 15 1
601 56.88 wind 3 43200 > th dose independent rect. 6 7
613 56.90 humidity 90 14400 > th dose independent rect. 18 9
615 56.90 temperature 20 14400 > th dose dependent rect. 17 1
622 56.93 wind 5 43200 < th dose independent rect. 5 12
624 56.94 radiation 1 14400 < th dose independent rect. 23 7
638 56.96 wind 5 43200 < th dose dependent rect. 8 5
673 57.03 wind 9 43200 < th dose dependent sin 3 NA
711 57.08 humidity 90 43200 < th dose independent rect. 18 4
715 57.08 wind 5 43200 > th dose independent rect. 5 12
720 57.09 humidity 80 14400 > th dose dependent rect. 18 1
730 57.10 wind 9 43200 < th dose dependent rect. 9 4
732 57.11 wind 3 43200 < th dose independent rect. 8 5
762 57.16 wind 3 43200 < th dose independent rect. 6 7
764 57.16 humidity 80 14400 > th dose independent rect. 8 12
797 57.21 wind 9 43200 > th dose independent rect. 19 20
805 57.22 wind 3 43200 < th dose independent rect. 8 2
816 57.23 temperature 20 270 > th dose dependent rect. 23 22
817 57.24 humidity 90 43200 > th dose independent rect. 9 1
870 57.31 temperature 30 14400 > th dose independent rect. 15 1
872 57.31 temperature 25 1440 < th dose independent rect. 18 4
878 57.31 radiation 1 14400 < th dose dependent rect. 3 2
931 57.39 humidity 80 43200 < th dose dependent rect. 22 10
942 57.41 wind 9 43200 < th dose independent rect. 8 7
950 57.42 wind 3 43200 < th dose independent rect. 3 7
966 57.44 humidity 90 14400 < th dose independent rect. 17 9
967 57.44 humidity 80 14400 < th dose independent rect. 8 11
972 57.44 radiation 1 1440 < th dose dependent rect. 18 11
976 57.45 wind 3 43200 > th dose independent rect. 8 2
977 57.45 wind 3 43200 > th dose independent rect. 6 4
989 57.46 wind 3 43200 < th dose independent rect. 6 4