BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0268500 Os01g0268500|Os01g0268500
         (932 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0268500  Glycoside hydrolase, family 31 protein             1560   0.0  
Os07g0589100                                                      166   7e-41

>Os01g0268500 Glycoside hydrolase, family 31 protein
          Length = 932

 Score = 1560 bits (4038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 785/918 (85%), Positives = 785/918 (85%)

Query: 15  KTRKKDHVRLNNPFPRAVPSSSLRHRDAAPPLSFSPSSKLAHGAHDFPVGPHFLLRWDPS 74
           KTRKKDHVRLNNPFPRAVPSSSLRHRDAAPPLSFSPSSKLAHGAHDFPVGPHFLLRWDPS
Sbjct: 15  KTRKKDHVRLNNPFPRAVPSSSLRHRDAAPPLSFSPSSKLAHGAHDFPVGPHFLLRWDPS 74

Query: 75  LGGAVSLAPRRGGGGATMWETVPGVAFVSAASVDTEADECRGSFALRDGRARLVPDRQXX 134
           LGGAVSLAPRRGGGGATMWETVPGVAFVSAASVDTEADECRGSFALRDGRARLVPDRQ  
Sbjct: 75  LGGAVSLAPRRGGGGATMWETVPGVAFVSAASVDTEADECRGSFALRDGRARLVPDRQRV 134

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXFQASEHEQARFPVVVITGVVSARKPTPSPSCLCX 194
                                     FQASEHEQARFPVVVITGVVSARKPTPSPSCLC 
Sbjct: 135 DRIRAVYRRDADADADADLLRVAGAAFQASEHEQARFPVVVITGVVSARKPTPSPSCLCG 194

Query: 195 XXXXXXXXXXPVLSARYWILLEEKSDTQVAFRVNLGDYQWSCDHDRHATHXXXXXXXXXX 254
                     PVLSARYWILLEEKSDTQVAFRVNLGDYQWSCDHDRHATH          
Sbjct: 195 RRRAAAAAGRPVLSARYWILLEEKSDTQVAFRVNLGDYQWSCDHDRHATHPSPLPSPSPS 254

Query: 255 XXXRTHRAGSILRLRLSTRVQRXXXXXXXXXXLAFAAAGVPADRXXXXXXXXXXXXXXXX 314
              RTHRAGSILRLRLSTRVQR          LAFAAAGVPADR                
Sbjct: 255 TSPRTHRAGSILRLRLSTRVQRSSGGSKKKKKLAFAAAGVPADREELAPLVPAAAAKEEL 314

Query: 315 XFNRVWMTLASSREERFYGFGEQFSRVEFKGKRVPVLVQEQGIGRGDQPITFAANLVSYR 374
            FNRVWMTLASSREERFYGFGEQFSRVEFKGKRVPVLVQEQGIGRGDQPITFAANLVSYR
Sbjct: 315 EFNRVWMTLASSREERFYGFGEQFSRVEFKGKRVPVLVQEQGIGRGDQPITFAANLVSYR 374

Query: 375 SGGNWSTTYAPSPFYMTSKMRSLYLEGYDYSIFDLTKPDRVQIQVYGSSVQGRILHGGSP 434
           SGGNWSTTYAPSPFYMTSKMRSLYLEGYDYSIFDLTKPDRVQIQVYGSSVQGRILHGGSP
Sbjct: 375 SGGNWSTTYAPSPFYMTSKMRSLYLEGYDYSIFDLTKPDRVQIQVYGSSVQGRILHGGSP 434

Query: 435 TELITSYTESTGRPPALPRWITSGAVVGMQGGTDAVRRVWKQLQDHDVPVSAFWLQDWVG 494
           TELITSYTESTGRPPALPRWITSGAVVGMQGGTDAVRRVWKQLQDHDVPVSAFWLQDWVG
Sbjct: 435 TELITSYTESTGRPPALPRWITSGAVVGMQGGTDAVRRVWKQLQDHDVPVSAFWLQDWVG 494

Query: 495 QRKTSIGSQLWWNWEVDDDHYAGWNXXXXXXXXXXXXTMTYCNPCLVPMDKKANARRHLF 554
           QRKTSIGSQLWWNWEVDDDHYAGWN            TMTYCNPCLVPMDKKANARRHLF
Sbjct: 495 QRKTSIGSQLWWNWEVDDDHYAGWNDLVRDLRRRGVRTMTYCNPCLVPMDKKANARRHLF 554

Query: 555 EEAKKLGLLVRDAAGEPYMMPNTAFDVAMLDFTNPAARAWFKGEVLAVMARGGAAGWMAD 614
           EEAKKLGLLVRDAAGEPYMMPNTAFDVAMLDFTNPAARAWFKGEVLAVMARGGAAGWMAD
Sbjct: 555 EEAKKLGLLVRDAAGEPYMMPNTAFDVAMLDFTNPAARAWFKGEVLAVMARGGAAGWMAD 614

Query: 615 FGEGLPLNARLHSSGSGDDGPVAAHNRYPELWARVNREFADEWRSGEHRRVXXXXXXXXX 674
           FGEGLPLNARLHSSGSGDDGPVAAHNRYPELWARVNREFADEWRSGEHRRV         
Sbjct: 615 FGEGLPLNARLHSSGSGDDGPVAAHNRYPELWARVNREFADEWRSGEHRRVADDADDGDG 674

Query: 675 XXELVFFVRAGFRESSRWAMLFWEGDQMVSWQANDGIKSSVVGLLTGGMSGFPLNHGDAG 734
             ELVFFVRAGFRESSRWAMLFWEGDQMVSWQANDGIKSSVVGLLTGGMSGFPLNHGDAG
Sbjct: 675 DGELVFFVRAGFRESSRWAMLFWEGDQMVSWQANDGIKSSVVGLLTGGMSGFPLNHGDAG 734

Query: 735 GYCTVDXXXXXXXXXXXXXXXXXXXSAFTVVFRTHEGNKPGSNCQFYSNNRTLAHFARCA 794
           GYCTVD                   SAFTVVFRTHEGNKPGSNCQFYSNNRTLAHFARCA
Sbjct: 735 GYCTVDLPLLRYRRSEELLLRWLELSAFTVVFRTHEGNKPGSNCQFYSNNRTLAHFARCA 794

Query: 795 KIYKAWEFYRIQLVEEAAEKGLPVARHLFLHYPEDQRVQKMTYQQFLVGTEMLVVPVLDK 854
           KIYKAWEFYRIQLVEEAAEKGLPVARHLFLHYPEDQRVQKMTYQQFLVGTEMLVVPVLDK
Sbjct: 795 KIYKAWEFYRIQLVEEAAEKGLPVARHLFLHYPEDQRVQKMTYQQFLVGTEMLVVPVLDK 854

Query: 855 GRSTVTAYFPMSDGGLWKHVWTGDEFXXXXXXXXXXXXMSHGSEAEVEARIGFPAVFVRV 914
           GRSTVTAYFPMSDGGLWKHVWTGDEF            MSHGSEAEVEARIGFPAVFVRV
Sbjct: 855 GRSTVTAYFPMSDGGLWKHVWTGDEFGGRTSRGGVGEGMSHGSEAEVEARIGFPAVFVRV 914

Query: 915 GSTVGERFVRNLRDLKVL 932
           GSTVGERFVRNLRDLKVL
Sbjct: 915 GSTVGERFVRNLRDLKVL 932



>Os07g0589100 
          Length = 338

 Score =  166 bits (420), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/189 (54%), Positives = 108/189 (57%), Gaps = 11/189 (5%)

Query: 111 ADECRGSFALRDGRARLVPDRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQASEHEQAR 170
           ADECR SFAL D RARLVPD Q                            FQASEHEQ R
Sbjct: 3   ADECRCSFALSDSRARLVPDHQCVDRIHAVYRCDADAVDTDLLRGTA---FQASEHEQTR 59

Query: 171 FPVVVITGVVSARKPTPSPSCLCXXXXXXXXXXXPVLSARYWILLEEKSDTQVAFRVNLG 230
           FPVVVI GVVSA+KPT SP CLC           PVLS RY ILLEEK+DTQVAFR+ LG
Sbjct: 60  FPVVVIIGVVSAKKPTRSPLCLCGWRRAAGKR--PVLSTRYLILLEEKNDTQVAFRIKLG 117

Query: 231 DYQWSCDH-DRHATHXXXXXXXXXXXXXRTHRAGSILRLRLSTRVQRXXXXXXXXXXLAF 289
           DYQWSCDH + HATH             RTHRAGSILRLRLSTRVQ           L+F
Sbjct: 118 DYQWSCDHCNHHATH----PSLSPSTSPRTHRAGSILRLRLSTRVQWSSSNGKKKKKLSF 173

Query: 290 AAAGVPADR 298
             A V  DR
Sbjct: 174 -TADVSVDR 181



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.135    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,086,879
Number of extensions: 1327757
Number of successful extensions: 3217
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3216
Number of HSP's successfully gapped: 2
Length of query: 932
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 822
Effective length of database: 11,292,261
Effective search space: 9282238542
Effective search space used: 9282238542
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 161 (66.6 bits)