Os01g0268500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 31 protein.
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Os01g0268500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 341.67 | 0.868 | 3.58 | 1.63 | 0.936 | -1.48 | 0.535 | 2.72 | 0.335 | 22.3 | 25.18 | 1540 | -- | -- |
| 344.94 | 0.865 | 3.65 | 0.799 | 0.973 | -1.12 | 0.531 | -- | 0.186 | 22.5 | 25 | 1487 | -- | -- |
| 342.75 | 0.862 | 3.58 | 1.64 | 0.934 | -1.48 | -- | 2.79 | 0.346 | 22.5 | 25.1 | 1530 | -- | -- |
| 345.51 | 0.866 | 3.67 | 0.869 | 0.927 | -1.16 | -- | -- | 0.15 | 22.6 | 25.1 | 1491 | -- | -- |
| 395.68 | 0.926 | 3.56 | 1.61 | -- | -1.42 | -- | 2.72 | 0.335 | -- | 25.1 | 1540 | -- | -- |
| 401.85 | 0.94 | 3.7 | 0.479 | 0.884 | -- | 0.508 | -- | 0.0107 | 22.3 | -- | -- | -- | -- |
| 402.82 | 0.94 | 3.7 | 0.457 | 0.88 | -- | -- | -- | 0.00846 | 22.4 | -- | -- | -- | -- |
| 398.22 | 0.929 | 3.65 | 0.868 | -- | -1.15 | -- | -- | 0.148 | -- | 25.1 | 1541 | -- | -- |
| 363.92 | 0.888 | 3.7 | -- | 0.936 | -1.02 | -- | -- | 0.0388 | 22.6 | 25.37 | 1530 | -- | -- |
| 450.16 | 0.991 | 3.68 | 0.472 | -- | -- | -- | -- | 0.0115 | -- | -- | -- | -- | -- |
| 408.33 | 0.945 | 3.71 | -- | 0.883 | -- | -- | -- | -0.0425 | 22.4 | -- | -- | -- | -- |
| 413.91 | 0.951 | 3.67 | -- | -- | -1.31 | -- | -- | 0.026 | -- | 25.1 | 1541 | -- | -- |
| 456.04 | 0.997 | 3.69 | -- | -- | -- | -- | -- | -0.0408 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 336.96 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 19 |
| 2 | 338.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 3 | 338.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 6 | 338.59 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 7 |
| 8 | 338.72 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 40 | 340.08 | radiation | 1 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 50 | 340.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 16 |
| 51 | 340.29 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 12 |
| 80 | 340.66 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 102 | 340.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 104 | 340.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 131 | 341.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 135 | 341.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 138 | 341.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 192 | 341.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 18 |
| 198 | 341.54 | radiation | 1 | 720 | < th | dose independent | sin | 22 | NA |
| 207 | 341.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 229 | 341.71 | radiation | 10 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 243 | 341.76 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 263 | 341.84 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 277 | 341.89 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 329 | 342.07 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 366 | 342.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 375 | 342.30 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 424 | 342.92 | humidity | 50 | 720 | > th | dose dependent | sin | 18 | NA |
| 465 | 343.29 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 475 | 343.34 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 486 | 343.38 | radiation | 10 | 1440 | > th | dose independent | sin | 16 | NA |
| 506 | 343.52 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 570 | 343.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 646 | 344.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 786 | 344.88 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 7 |
| 918 | 345.47 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |