BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0200000 Os01g0200000|AK067737
         (316 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0200000  Similar to autophagocytosis protein AUT1-like ...   651   0.0  
Os10g0560450  Autophagocytosis associated protein, N-termina...   405   e-113

>Os01g0200000 Similar to autophagocytosis protein AUT1-like [Oryza sativa
           (japonica cultivar-group)]
          Length = 316

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MQVKQKVYELYKGTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS 60
           MQVKQKVYELYKGTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS
Sbjct: 1   MQVKQKVYELYKGTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS 60

Query: 61  KRKPYLPPDKQFLVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKQ 120
           KRKPYLPPDKQFLVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKQ
Sbjct: 61  KRKPYLPPDKQFLVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKQ 120

Query: 121 EEEEDIPSMDTLDIGKTEGIKSIPSYFSAGKKAEEEEDIPDMDTYEDSGNDSVATAQPSY 180
           EEEEDIPSMDTLDIGKTEGIKSIPSYFSAGKKAEEEEDIPDMDTYEDSGNDSVATAQPSY
Sbjct: 121 EEEEDIPSMDTLDIGKTEGIKSIPSYFSAGKKAEEEEDIPDMDTYEDSGNDSVATAQPSY 180

Query: 181 FVAEEPEDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMPLKPELVFEDISQDHARK 240
           FVAEEPEDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMPLKPELVFEDISQDHARK
Sbjct: 181 FVAEEPEDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMPLKPELVFEDISQDHARK 240

Query: 241 TVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSQGVEPEVDKYLFIFLKFMASVIPT 300
           TVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSQGVEPEVDKYLFIFLKFMASVIPT
Sbjct: 241 TVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSQGVEPEVDKYLFIFLKFMASVIPT 300

Query: 301 IEYDYTMDFDLGSTSR 316
           IEYDYTMDFDLGSTSR
Sbjct: 301 IEYDYTMDFDLGSTSR 316



>Os10g0560450 Autophagocytosis associated protein, N-terminal domain containing
           protein
          Length = 202

 Score =  405 bits (1041), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/202 (97%), Positives = 200/202 (99%)

Query: 1   MQVKQKVYELYKGTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS 60
           MQVKQKVYELYKGTVERVTGPRTVSAFL+KGVLSVPEFILAGDNLVSKCPTWSWEAGDPS
Sbjct: 1   MQVKQKVYELYKGTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS 60

Query: 61  KRKPYLPPDKQFLVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKQ 120
           KRKPYLPPDKQFLVTRNVPC+RRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASK 
Sbjct: 61  KRKPYLPPDKQFLVTRNVPCVRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKP 120

Query: 121 EEEEDIPSMDTLDIGKTEGIKSIPSYFSAGKKAEEEEDIPDMDTYEDSGNDSVATAQPSY 180
           EEEEDIPSMDTLDIGKTEGI SIPSYFSAGKKAEEEEDIPDMDTYED+GNDSVATAQPSY
Sbjct: 121 EEEEDIPSMDTLDIGKTEGINSIPSYFSAGKKAEEEEDIPDMDTYEDTGNDSVATAQPSY 180

Query: 181 FVAEEPEDDNILRTRTYDVSIT 202
           FVAEEPEDDNILRTRTYDVSIT
Sbjct: 181 FVAEEPEDDNILRTRTYDVSIT 202



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,710,430
Number of extensions: 538142
Number of successful extensions: 1492
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1488
Number of HSP's successfully gapped: 2
Length of query: 316
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 215
Effective length of database: 11,762,187
Effective search space: 2528870205
Effective search space used: 2528870205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 156 (64.7 bits)