BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0169500 Os01g0169500|AK120051
         (1842 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0169500  Armadillo-like helical domain containing protein   3203   0.0  

>Os01g0169500 Armadillo-like helical domain containing protein
          Length = 1842

 Score = 3203 bits (8305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1581/1711 (92%), Positives = 1581/1711 (92%)

Query: 117  CFVKAVAALVSCALRSGSAASRFPPHDHPFVQALASGADGXXXXXXXXXXXXXXEGVHGV 176
            CFVKAVAALVSCALRSGSAASRFPPHDHPFVQALASGADG              EGVHGV
Sbjct: 117  CFVKAVAALVSCALRSGSAASRFPPHDHPFVQALASGADGARAELQRQAARLVAEGVHGV 176

Query: 177  VGFLRPFVMFAAVRKGDTAFVKDLIGXXXXXXXXXXRPDSAVPVLKLLAECLLHFGRGDG 236
            VGFLRPFVMFAAVRKGDTAFVKDLIG          RPDSAVPVLKLLAECLLHFGRGDG
Sbjct: 177  VGFLRPFVMFAAVRKGDTAFVKDLIGALAAAAVAAARPDSAVPVLKLLAECLLHFGRGDG 236

Query: 237  EEVRLWLSSVECLVDAYVVLLRKFAHAQMATYDAQANSVELIEMLLSQCSLHHQFMGNTS 296
            EEVRLWLSSVECLVDAYVVLLRKFAHAQMATYDAQANSVELIEMLLSQCSLHHQFMGNTS
Sbjct: 237  EEVRLWLSSVECLVDAYVVLLRKFAHAQMATYDAQANSVELIEMLLSQCSLHHQFMGNTS 296

Query: 297  VVLGLSKHLFLAQKDLGLCYLPEISVVLSSLAFILSGLEFEHEQLSGLKLLAFLIEWRHE 356
            VVLGLSKHLFLAQKDLGLCYLPEISVVLSSLAFILSGLEFEHEQLSGLKLLAFLIEWRHE
Sbjct: 297  VVLGLSKHLFLAQKDLGLCYLPEISVVLSSLAFILSGLEFEHEQLSGLKLLAFLIEWRHE 356

Query: 357  NALRTNEAVHHFSEEIVCVLPVINLVISPSKSVKSVASHVLSRFHVLVLDLLASCSSEQQ 416
            NALRTNEAVHHFSEEIVCVLPVINLVISPSKSVKSVASHVLSRFHVLVLDLLASCSSEQQ
Sbjct: 357  NALRTNEAVHHFSEEIVCVLPVINLVISPSKSVKSVASHVLSRFHVLVLDLLASCSSEQQ 416

Query: 417  DSSMVHHISKPTSILPKLVHHLWSQSSSSGFIFTKYITSRGLAESAGNSTEPNYWTHQIN 476
            DSSMVHHISKPTSILPKLVHHLWSQSSSSGFIFTKYITSRGLAESAGNSTEPNYWTHQIN
Sbjct: 417  DSSMVHHISKPTSILPKLVHHLWSQSSSSGFIFTKYITSRGLAESAGNSTEPNYWTHQIN 476

Query: 477  EYLSAXXXXXXXXXXXXXXXIQXXXXXXXXXXXXXXXXMHPKIGTSAAQSLALLGATDPK 536
            EYLSA               IQ                MHPKIGTSAAQSLALLGATDPK
Sbjct: 477  EYLSALRKEKLSLDSLSSKKIQSVAISSLLSSAVSVLVMHPKIGTSAAQSLALLGATDPK 536

Query: 537  LGMPLLVLILFYTKVLYSNNNCDANIXXXXXXXXXXXAVHGFVLPLSLQLISSMLKKDVK 596
            LGMPLLVLILFYTKVLYSNNNCDANI           AVHGFVLPLSLQLISSMLKKDVK
Sbjct: 537  LGMPLLVLILFYTKVLYSNNNCDANILLSLLESLPSLAVHGFVLPLSLQLISSMLKKDVK 596

Query: 597  SVLYPIAVRLLCKMWTVTDWAFQNLQGTLDPENFSNSVDDREVFTSIAASVRDVCKQNPD 656
            SVLYPIAVRLLCKMWTVTDWAFQNLQGTLDPENFSNSVDDREVFTSIAASVRDVCKQNPD
Sbjct: 597  SVLYPIAVRLLCKMWTVTDWAFQNLQGTLDPENFSNSVDDREVFTSIAASVRDVCKQNPD 656

Query: 657  RGVDLILSVSACIESRDSVVQALGLESLSYLCEEDVVDFYTAWKVISKQLLDFSIDPTVS 716
            RGVDLILSVSACIESRDSVVQALGLESLSYLCEEDVVDFYTAWKVISKQLLDFSIDPTVS
Sbjct: 657  RGVDLILSVSACIESRDSVVQALGLESLSYLCEEDVVDFYTAWKVISKQLLDFSIDPTVS 716

Query: 717  HGLCILLRWGAMDSEAYPGTSKHLIQILWSIGTYREKNVDPLWVKARGTAFQSLSHYKIS 776
            HGLCILLRWGAMDSEAYPGTSKHLIQILWSIGTYREKNVDPLWVKARGTAFQSLSHYKIS
Sbjct: 717  HGLCILLRWGAMDSEAYPGTSKHLIQILWSIGTYREKNVDPLWVKARGTAFQSLSHYKIS 776

Query: 777  LIKDAIPDFWRINYECFTTERNLEVLKAMDNFQAEIINFEHINRRRLTTDKITTVHKFEK 836
            LIKDAIPDFWRINYECFTTERNLEVLKAMDNFQAEIINFEHINRRRLTTDKITTVHKFEK
Sbjct: 777  LIKDAIPDFWRINYECFTTERNLEVLKAMDNFQAEIINFEHINRRRLTTDKITTVHKFEK 836

Query: 837  LLDAFPQAVFKGKSAHHRFPGAALLTLNFTPKDILHEGKSKDLPRVHAAYEQALVEMAES 896
            LLDAFPQAVFKGKSAHHRFPGAALLTLNFTPKDILHEGKSKDLPRVHAAYEQALVEMAES
Sbjct: 837  LLDAFPQAVFKGKSAHHRFPGAALLTLNFTPKDILHEGKSKDLPRVHAAYEQALVEMAES 896

Query: 897  MYISRNMVVALLALHSWKSFVSNWMQAVIACLDTKESSKLNKASKAADDIFKILCKCXXX 956
            MYISRNMVVALLALHSWKSFVSNWMQAVIACLDTKESSKLNKASKAADDIFKILCKC   
Sbjct: 897  MYISRNMVVALLALHSWKSFVSNWMQAVIACLDTKESSKLNKASKAADDIFKILCKCVPV 956

Query: 957  XXXXXXXXIALAIGALCLVVPPTAHLVISSASDFLLRWLFQYEHEHQQWSTALSLGLISN 1016
                    IALAIGALCLVVPPTAHLVISSASDFLLRWLFQYEHEHQQWSTALSLGLISN
Sbjct: 957  STPSVVVSIALAIGALCLVVPPTAHLVISSASDFLLRWLFQYEHEHQQWSTALSLGLISN 1016

Query: 1017 CFHPTDKRSKLQVINGLLEVISKTESYLVKGACGLGLGYCCQALLARADNAADSELEATT 1076
            CFHPTDKRSKLQVINGLLEVISKTESYLVKGACGLGLGYCCQALLARADNAADSELEATT
Sbjct: 1017 CFHPTDKRSKLQVINGLLEVISKTESYLVKGACGLGLGYCCQALLARADNAADSELEATT 1076

Query: 1077 QLTERASVEEILHTLTTSLVQLCPFSCYSLKKLSICGIKSLEGMEEKYVSLEDDPWXXXX 1136
            QLTERASVEEILHTLTTSLVQLCPFSCYSLKKLSICGIKSLEGMEEKYVSLEDDPW    
Sbjct: 1077 QLTERASVEEILHTLTTSLVQLCPFSCYSLKKLSICGIKSLEGMEEKYVSLEDDPWAVAG 1136

Query: 1137 XXXXXXXXXXXXYRLGAYEAIIEVKNILISWIPDVXXXXXXXXXXXXXXXCMGSCLALPS 1196
                        YRLGAYEAIIEVKNILISWIPDV               CMGSCLALPS
Sbjct: 1137 LVLGLGNSVVSLYRLGAYEAIIEVKNILISWIPDVDSSSLLFDEEDSASLCMGSCLALPS 1196

Query: 1197 VLAFCQKVELLNDDLDALFNRYTSLATNLLSLKKSGTIFQNLLMAICIGAGSFLSSILND 1256
            VLAFCQKVELLNDDLDALFNRYTSLATNLLSLKKSGTIFQNLLMAICIGAGSFLSSILND
Sbjct: 1197 VLAFCQKVELLNDDLDALFNRYTSLATNLLSLKKSGTIFQNLLMAICIGAGSFLSSILND 1256

Query: 1257 GVHAMKFTDVKDLLDTLKHIYTHPYPPLVHLGGMLGTVNAFGAGAGDLTGICRQPTNSQI 1316
            GVHAMKFTDVKDLLDTLKHIYTHPYPPLVHLGGMLGTVNAFGAGAGDLTGICRQPTNSQI
Sbjct: 1257 GVHAMKFTDVKDLLDTLKHIYTHPYPPLVHLGGMLGTVNAFGAGAGDLTGICRQPTNSQI 1316

Query: 1317 KHEKESSLVRGPVLTSSVGETLSTSMIQEIFLLAKDAEDDHIKDYAAWAISFLRSRWLSK 1376
            KHEKESSLVRGPVLTSSVGETLSTSMIQEIFLLAKDAEDDHIKDYAAWAISFLRSRWLSK
Sbjct: 1317 KHEKESSLVRGPVLTSSVGETLSTSMIQEIFLLAKDAEDDHIKDYAAWAISFLRSRWLSK 1376

Query: 1377 NQIIFXXXXXXXXXXXXXXXXXXXXXXLVWNLSQWLRDLNFEKPDSMVSTSTVATVLRCL 1436
            NQIIF                      LVWNLSQWLRDLNFEKPDSMVSTSTVATVLRCL
Sbjct: 1377 NQIIFDDDCSQRNSSDSNQSTSFSDESLVWNLSQWLRDLNFEKPDSMVSTSTVATVLRCL 1436

Query: 1437 SKAPRLPSIDWGVIVRRCMNVEAHIPDMLTNHHDPKLLREECLYISLAHASHISPLLHFI 1496
            SKAPRLPSIDWGVIVRRCMNVEAHIPDMLTNHHDPKLLREECLYISLAHASHISPLLHFI
Sbjct: 1437 SKAPRLPSIDWGVIVRRCMNVEAHIPDMLTNHHDPKLLREECLYISLAHASHISPLLHFI 1496

Query: 1497 DDLTDLSRFRRLEINLQSILLQYLSTLMKLFSLSRLDKLSEDLTEYLYSPTSSYLDYSSE 1556
            DDLTDLSRFRRLEINLQSILLQYLSTLMKLFSLSRLDKLSEDLTEYLYSPTSSYLDYSSE
Sbjct: 1497 DDLTDLSRFRRLEINLQSILLQYLSTLMKLFSLSRLDKLSEDLTEYLYSPTSSYLDYSSE 1556

Query: 1557 QRSMLRTSFWKGIRECLVEDVSEESSGFSCIKKCIQSLSPLLSLHKDGQPEFIEEWSAAI 1616
            QRSMLRTSFWKGIRECLVEDVSEESSGFSCIKKCIQSLSPLLSLHKDGQPEFIEEWSAAI
Sbjct: 1557 QRSMLRTSFWKGIRECLVEDVSEESSGFSCIKKCIQSLSPLLSLHKDGQPEFIEEWSAAI 1616

Query: 1617 KCLTVAQKGLLGDMLQVEISSSFNELEHIDVAKKIIIRARMCSSGCGSVDELGNIKTTIL 1676
            KCLTVAQKGLLGDMLQVEISSSFNELEHIDVAKKIIIRARMCSSGCGSVDELGNIKTTIL
Sbjct: 1617 KCLTVAQKGLLGDMLQVEISSSFNELEHIDVAKKIIIRARMCSSGCGSVDELGNIKTTIL 1676

Query: 1677 STRLDGVWWNVLVEVAGALYYADSRMKKQWLLDALDIGCVTAHPSTVLHFVGLLCGSCCI 1736
            STRLDGVWWNVLVEVAGALYYADSRMKKQWLLDALDIGCVTAHPSTVLHFVGLLCGSCCI
Sbjct: 1677 STRLDGVWWNVLVEVAGALYYADSRMKKQWLLDALDIGCVTAHPSTVLHFVGLLCGSCCI 1736

Query: 1737 YMPLLIVNPTNVLSDLPVTLPSFLSSSIWDDLRNSVADKLWLLTARIYTWAEQLTHSVGL 1796
            YMPLLIVNPTNVLSDLPVTLPSFLSSSIWDDLRNSVADKLWLLTARIYTWAEQLTHSVGL
Sbjct: 1737 YMPLLIVNPTNVLSDLPVTLPSFLSSSIWDDLRNSVADKLWLLTARIYTWAEQLTHSVGL 1796

Query: 1797 ARHDHIHGSEAEMAIFLANILRCTCIAVEDH 1827
            ARHDHIHGSEAEMAIFLANILRCTCIAVEDH
Sbjct: 1797 ARHDHIHGSEAEMAIFLANILRCTCIAVEDH 1827




 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%)

Query: 19 VALGRLVDRTRVPDPTLQRHAVAALFRHLLTSV 51
          VALGRLVDRTRVPDPTLQRHAVAALFRHLLTSV
Sbjct: 19 VALGRLVDRTRVPDPTLQRHAVAALFRHLLTSV 51



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.322    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 52,277,648
Number of extensions: 1942040
Number of successful extensions: 4352
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4349
Number of HSP's successfully gapped: 2
Length of query: 1842
Length of database: 17,035,801
Length adjustment: 115
Effective length of query: 1727
Effective length of database: 11,031,191
Effective search space: 19050866857
Effective search space used: 19050866857
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 163 (67.4 bits)