Os12g0636600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0636600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.45 | 0.686 | 5.84 | 1.44 | 0.77 | 1.7 | -0.11 | -0.399 | -0.375 | 10.8 | 23.2 | 2101 | -- | -- |
| 213.17 | 0.68 | 5.85 | 1.29 | 0.805 | 1.71 | -0.104 | -- | -0.437 | 11.1 | 22.9 | 1966 | -- | -- |
| 213.21 | 0.68 | 5.85 | 1.39 | 0.797 | 1.69 | -- | -0.285 | -0.397 | 10.8 | 23.1 | 2060 | -- | -- |
| 210.84 | 0.676 | 5.88 | 1.26 | 0.836 | 1.75 | -- | -- | -0.51 | 10.9 | 22.47 | 1957 | -- | -- |
| 248.07 | 0.734 | 5.86 | 1.38 | -- | 1.83 | -- | -0.174 | -0.362 | -- | 23.1 | 2212 | -- | -- |
| 330.22 | 0.852 | 6.02 | 0.588 | 0.924 | -- | -0.0452 | -- | -1.14 | 10.9 | -- | -- | -- | -- |
| 330.23 | 0.851 | 6.02 | 0.586 | 0.925 | -- | -- | -- | -1.14 | 10.9 | -- | -- | -- | -- |
| 231 | 0.708 | 5.89 | 1.15 | -- | 1.78 | -- | -- | -0.515 | -- | 22.45 | 842 | -- | -- |
| 249.2 | 0.735 | 5.93 | -- | 0.893 | 1.42 | -- | -- | -0.744 | 10.8 | 22.68 | 1744 | -- | -- |
| 383.25 | 0.915 | 6.04 | 0.567 | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
| 339.29 | 0.862 | 6.03 | -- | 0.92 | -- | -- | -- | -1.21 | 10.8 | -- | -- | -- | -- |
| 263.85 | 0.757 | 5.94 | -- | -- | 1.57 | -- | -- | -0.715 | -- | 22.42 | 840 | -- | -- |
| 391.72 | 0.924 | 6.06 | -- | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.80 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 2 | 219.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 5 | 220.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 8 | 220.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 74 | 223.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 77 | 223.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 15 |
| 81 | 223.57 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 83 | 223.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 90 | 223.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 93 | 223.69 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 94 | 223.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 108 | 223.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 131 | 224.17 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 168 | 224.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 221 | 224.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 238 | 225.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 262 | 225.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 278 | 225.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 322 | 225.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 328 | 225.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 469 | 226.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 526 | 227.26 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 707 | 228.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 712 | 228.12 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 717 | 228.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 757 | 228.39 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 817 | 228.60 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 843 | 228.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 9 |