Os12g0636400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Epoxide hydrolase family protein.
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Os12g0636400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Epoxide hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.55 | 0.592 | 9.11 | 2.72 | 1.11 | -1.14 | 0.557 | -0.0471 | 1.04 | 24 | 24.24 | 1356 | -- | -- |
| 158.31 | 0.586 | 9.1 | 2.76 | 1.13 | -1.16 | 0.554 | -- | 1.08 | 0.00323 | 22.8 | 1319 | -- | -- |
| 159.86 | 0.589 | 9.1 | 2.77 | 1.1 | -1.15 | -- | 0.179 | 1.06 | 24 | 24.09 | 1357 | -- | -- |
| 159.46 | 0.588 | 9.09 | 2.73 | 1.1 | -1.16 | -- | -- | 1.11 | 24 | 22.71 | 1341 | -- | -- |
| 199.34 | 0.661 | 9.07 | 2.62 | -- | -1.65 | -- | -0.13 | 1.1 | -- | 22.8 | 1570 | -- | -- |
| 207.1 | 0.675 | 9.15 | 2.34 | 0.985 | -- | 0.411 | -- | 0.865 | 23.6 | -- | -- | -- | -- |
| 207.83 | 0.675 | 9.15 | 2.32 | 0.983 | -- | -- | -- | 0.863 | 23.6 | -- | -- | -- | -- |
| 197.91 | 0.658 | 9.07 | 2.65 | -- | -1.68 | -- | -- | 1.12 | -- | 22.5 | 1575 | -- | -- |
| 331.42 | 0.848 | 9.25 | -- | 1.09 | -0.629 | -- | -- | 0.456 | 24 | 33.5 | 1352 | -- | -- |
| 268.63 | 0.766 | 9.13 | 2.35 | -- | -- | -- | -- | 0.875 | -- | -- | -- | -- | -- |
| 349.85 | 0.875 | 9.21 | -- | 1.01 | -- | -- | -- | 0.605 | 23.8 | -- | -- | -- | -- |
| 377.34 | 0.908 | 9.15 | -- | -- | -1.19 | -- | -- | 0.765 | -- | 22.5 | 1575 | -- | -- |
| 414.17 | 0.95 | 9.18 | -- | -- | -- | -- | -- | 0.614 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 2 | 150.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 4 | 151.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 200 | 156.09 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 247 | 156.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 267 | 157.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 280 | 157.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 392 | 158.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 18 |
| 428 | 158.29 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 665 | 159.33 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 752 | 159.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |