BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0636400 Os12g0636400|AK106721
(320 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324 340 7e-94
AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325 254 6e-68
AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332 251 3e-67
AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376 248 4e-66
AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305 234 5e-62
AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322 229 1e-60
AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321 221 5e-58
AT5G53050.2 | chr5:21510534-21513432 REVERSE LENGTH=397 56 3e-08
>AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324
Length = 323
Score = 340 bits (871), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 174/316 (55%), Positives = 213/316 (67%), Gaps = 5/316 (1%)
Query: 6 VRHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMXXXXXXXXXXXXPDLRG 65
VR NGI L+VAE+G +GP VLL+HGFPE W SWRHQ+ PDLRG
Sbjct: 5 VREKKIKTNGIWLNVAEKGDEEGPLVLLLHGFPETWYSWRHQIDFLSSHGYHVVAPDLRG 64
Query: 66 YGDSTVPDDPAAYTVFHIVGDLVALLDHLALPKVMVVGHDLGAQVAWHLCLFRPDMLLAV 125
YGDS +YTV H+V D++ LLDH + V GHD GA + W LCLFRPD +
Sbjct: 65 YGDSDSLPSHESYTVSHLVADVIGLLDHYGTTQAFVAGHDWGAIIGWCLCLFRPDRVKGF 124
Query: 126 VNLGVPFFPRGPSSLSEAFAG--RDGLYIMQFQEPGRAERAFARYDVATVLKKFFSI-EI 182
++L VP+FPR P F DGLYI QFQ+PGRAE AFA++D +V+KKF I
Sbjct: 125 ISLSVPYFPRDPKLKPSDFFKIFGDGLYITQFQKPGRAEAAFAKHDCLSVMKKFLLITRT 184
Query: 183 DDLTAPPGVEIIDFLEARSTPLPWISEEELGQYAEKFQKSGFTGPINYYRMMDTNWRLTA 242
D L APP EIID LE ST WI+EEE+ YAEKFQ+SGFTGP+NYYR MD NW + A
Sbjct: 185 DYLVAPPDTEIIDHLEIPSTIPDWITEEEIQVYAEKFQRSGFTGPLNYYRSMDMNWEILA 244
Query: 243 PWQNAKIMVPTKFICGDKDTGLKS-FGTEHFVKSGAFKSVVPNLEVVIIE-GHHFIQQEQ 300
PWQ++KI+VPTKFI GDKD G + GT +VK FK VVPNLE+V+IE GHHFIQQE+
Sbjct: 245 PWQDSKIVVPTKFIAGDKDIGYEGPNGTMEYVKGEVFKIVVPNLEIVVIEGGHHFIQQEK 304
Query: 301 AERVNSEILSYFDKFT 316
+E+V+ EILS+ +K +
Sbjct: 305 SEQVSQEILSFLNKLS 320
>AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325
Length = 324
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 183/318 (57%), Gaps = 9/318 (2%)
Query: 4 EVVRHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMXXXXXXXXXXXXPDL 63
E + H NGI++HVA G GP +L +HGFP+LW SWRHQ+ PDL
Sbjct: 2 EKIEHTTISTNGINMHVASIG--SGPVILFVHGFPDLWYSWRHQLVSFAALGYRAIAPDL 59
Query: 64 RGYGDSTVPDDPAAYTVFHIVGDLVALLDHLALPKVMVVGHDLGAQVAWHLCLFRPDMLL 123
RGYGDS P +YT+ HIVGDLV LLD L + +V +VGHD GA VAW LC+ RPD +
Sbjct: 60 RGYGDSDAPPSRESYTILHIVGDLVGLLDSLGVDRVFLVGHDWGAIVAWWLCMIRPDRVN 119
Query: 124 AVVNLGVPFFPRGPS-SLSEAFAGR--DGLYIMQFQEPGRAERAFARYDVATVLKKFF-S 179
A+VN V F PR PS +AF D YI +FQEPG E FA+ D ++ +FF S
Sbjct: 120 ALVNTSVVFNPRNPSVKPVDAFRALFGDDYYICRFQEPGEIEEDFAQVDTKKLITRFFTS 179
Query: 180 IEIDDLTAPPGVEIIDFLEARSTPLPWISEEELGQYAEKFQKSGFTGPINYYRMMDTNWR 239
P V + S P W++E+++ Y +KF + GFTG +NYYR ++ +W
Sbjct: 180 RNPRPPCIPKSVGFRGLPDPPSLP-AWLTEQDVRFYGDKFSQKGFTGGLNYYRALNLSWE 238
Query: 240 LTAPWQNAKIMVPTKFICGDKDTGLKSFGTEHFVKSGAFKSVVPNL-EVVIIEG-HHFIQ 297
LTAPW +I VP KFI GD D GT+ ++ G K VP L EVV++EG HF+
Sbjct: 239 LTAPWTGLQIKVPVKFIVGDLDITYNIPGTKEYIHEGGLKKHVPFLQEVVVMEGVGHFLH 298
Query: 298 QEQAERVNSEILSYFDKF 315
QE+ + V I +F KF
Sbjct: 299 QEKPDEVTDHIYGFFKKF 316
>AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332
Length = 331
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 186/328 (56%), Gaps = 21/328 (6%)
Query: 4 EVVRHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMXXXXXXXXXXXXPDL 63
E + H VNGI++H+AE+GP +GP VLL+HGFP+LW +WRHQ+ PDL
Sbjct: 2 EGIDHRMVSVNGITMHIAEKGPKEGPVVLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDL 61
Query: 64 RGYGDSTVPDDPAAYTVFHIVGDLVALLDHLA--LPKVMVVGHDLGAQVAWHLCLFRPDM 121
RGYGDS P+ + YT ++VGDLVALLD +A KV +VGHD GA + W LCLFRP+
Sbjct: 62 RGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEK 121
Query: 122 LLAVVNLGVPFFPRGPS-----SLSEAFAGRDGLYIMQFQEPGRAERAFARYDVATVLKK 176
+ V L VP+ R P F D YI +FQEPG+ E A D L+
Sbjct: 122 INGFVCLSVPYRSRNPKVKPVQGFKAVFG--DDYYICRFQEPGKIEGEIASADPRIFLRN 179
Query: 177 FFSIEIDDLTAPPGVEIIDFLEARSTP------LP-WISEEELGQYAEKFQKSGFTGPIN 229
F+ PP + + + P LP W S+++L Y KF+K+GFTG +N
Sbjct: 180 LFTGRT---LGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGLN 236
Query: 230 YYRMMDTNWRLTAPWQNAKIMVPTKFICGDKDTGLKSFGTEHFVKSGAFKSVVPNL-EVV 288
YYR MD NW LTAPW AKI VP KF+ GD D + G + ++ G F + VP L E+V
Sbjct: 237 YYRAMDLNWELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKEYIHGGGFAADVPTLQEIV 296
Query: 289 IIE-GHHFIQQEQAERVNSEILSYFDKF 315
+IE HF+ QE+ + V + I +F K
Sbjct: 297 VIEDAGHFVNQEKPQEVTAHINDFFTKL 324
>AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376
Length = 375
Score = 248 bits (632), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 184/323 (56%), Gaps = 15/323 (4%)
Query: 6 VRHWNADVNGISLHVAEQ---GPADGPPVLLIHGFPELWLSWRHQMXXXXXXXXXXXXPD 62
V H VNGI++HVAE+ G + P +L +HGFPELW +WRHQM PD
Sbjct: 54 VEHKTLKVNGINMHVAEKPGSGSGEDPIILFLHGFPELWYTWRHQMVALSSLGYRTIAPD 113
Query: 63 LRGYGDSTVPDDPAAYTVFHIVGDLVALLDHLA--LPKVMVVGHDLGAQVAWHLCLFRPD 120
LRGYGD+ P+ YT ++ GD+VAL+D + V VVGHD GA +AW LC +RP+
Sbjct: 114 LRGYGDTEAPEKVEDYTYLNVDGDVVALIDAVTGGDKAVSVVGHDWGAMIAWQLCQYRPE 173
Query: 121 MLLAVVNLGVPFFPRGP-----SSLSEAFAGRDGLYIMQFQEPGRAERAFARYDVATVLK 175
+ A+VN+ V F PR P +L F D Y+ +FQ+ G E F + VLK
Sbjct: 174 KVKALVNMSVLFSPRNPVRVPVPTLRHVFG--DDYYVCRFQKAGEIETEFKKLGTENVLK 231
Query: 176 KFFSIEIDDLTAPPGVEIIDFLEARSTPLP-WISEEELGQYAEKFQKSGFTGPINYYRMM 234
+F + + P + E ++ LP W+++E+L Y K++ GFTGPINYYR +
Sbjct: 232 EFLTYKTPGPLNLPKDKYFKRSENAASALPLWLTQEDLDYYVTKYENKGFTGPINYYRNI 291
Query: 235 DTNWRLTAPWQNAKIMVPTKFICGDKDTGLKSFGTEHFVKSGAFKSVVPNL-EVVIIEG- 292
D NW LTAPW AKI VP KFI GD+D G + ++ G FK VP L E V+++G
Sbjct: 292 DRNWELTAPWTGAKIRVPVKFIIGDQDLTYNFPGAKEYINGGGFKRDVPLLDETVVLKGL 351
Query: 293 HHFIQQEQAERVNSEILSYFDKF 315
HF+ +E + +N I ++F KF
Sbjct: 352 GHFLHEENPDVINQHIHNFFHKF 374
>AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305
Length = 304
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 182/323 (56%), Gaps = 40/323 (12%)
Query: 8 HWNADVNGISLHVAEQGP------ADGPPVLL-IHGFPELWLSWRHQMXXXXXXXXXXXX 60
H VNGI++HVAE+ P A PPV+L +HGFPELW +WRHQM
Sbjct: 7 HSFVKVNGITMHVAEKSPSVAGNGAIRPPVILFLHGFPELWYTWRHQMVALSSLGYRTIA 66
Query: 61 PDLRGYGDSTVPDDPAAYTVFHIVGDLVALLDHLA--LPKVMVVGHDLGAQVAWHLCLFR 118
PDLRGYGD+ P+ AYT H+VGDL+ L+D + KV VVGHD GA +AWHLCLFR
Sbjct: 67 PDLRGYGDTDAPESVDAYTSLHVVGDLIGLIDAVVGDREKVFVVGHDWGAIIAWHLCLFR 126
Query: 119 PDMLLAVVNLGVPFFP----RGPSSLSEAFAGRDGLYIMQFQEPGRAERAFARYDVATVL 174
PD + A+VN+ V F P R P+S +AF G D YI +FQ + V V
Sbjct: 127 PDRVKALVNMSVVFDPWNPKRKPTSTFKAFYG-DDYYICRFQ----LLEILIKIHVCIVG 181
Query: 175 KKFFSIEIDDLTAPPGVEIIDFLEARSTPLPWISEEELGQYAEKFQKSGFTGPINYYRMM 234
K++ DD + P W+++ ++ Y K++K+GFTGP+NYYR M
Sbjct: 182 KRY-----DDSVSLPS---------------WLTDSDVKYYVSKYEKNGFTGPVNYYRNM 221
Query: 235 DTNWRLTAPWQNAKIMVPTKFICGDKDTGLKSFGTEHFVKSGAFKSVVPNL-EVVIIEG- 292
D W L NAK+ VP KFI GD+D G++ ++ G FKS VP L EVV+I+G
Sbjct: 222 DRTWELMGSLSNAKVKVPVKFIIGDQDLTYHIPGSKKYIHDGRFKSHVPLLDEVVVIKGV 281
Query: 293 HHFIQQEQAERVNSEILSYFDKF 315
HFI +E+ + ++ I YF F
Sbjct: 282 GHFIHEERPDEISKHIHDYFLTF 304
>AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322
Length = 321
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 183/322 (56%), Gaps = 13/322 (4%)
Query: 6 VRHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMXXXXXXXXXXXXPDLRG 65
+ H NGI +HVA QGP+DGP VLL+HGFPELW SWRHQ+ PDLRG
Sbjct: 1 MEHRKVRGNGIDIHVAIQGPSDGPIVLLLHGFPELWYSWRHQIPGLAARGYRAVAPDLRG 60
Query: 66 YGDSTVPDDPAAYTVFHIVGDLVALLDHLALP---KVMVVGHDLGAQVAWHLCLFRPDML 122
YGDS P + ++YT F+IVGDL+A++ L KV VVGHD GA +AW+LCLFRPD +
Sbjct: 61 YGDSDAPAEISSYTCFNIVGDLIAVISALTASEDEKVFVVGHDWGALIAWYLCLFRPDRV 120
Query: 123 LAVVNLGVPFFPR------GPSSLSEAFAGRDGLYIMQFQEPGRAERAFARYDVATVLKK 176
A+VNL VPF R P AF G D YI +FQE G E A V+K+
Sbjct: 121 KALVNLSVPFSFRPTDPSVKPVDRMRAFYG-DDYYICRFQEFGDVEAEIAEVGTERVMKR 179
Query: 177 FFSIEIDDLTAPPGVEIIDFLEARSTPLP-WISEEELGQYAEKFQKSGFTGPINYYRMMD 235
+ P + + + PLP W++EE++ + KF++ GF+GP+NYYR +
Sbjct: 180 LLTYRTPGPVIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFEEKGFSGPVNYYRNFN 239
Query: 236 TNWRLTAPWQNAKIMVPTKFICGDKDTGLKSFGTEHFVKSGAFKSVVPNLEV-VIIEG-H 293
N L PW +KI VPTKF+ G+ D G + ++ FK VP LE V++EG
Sbjct: 240 RNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLLEEPVVMEGVA 299
Query: 294 HFIQQEQAERVNSEILSYFDKF 315
HFI QE+ + + IL + KF
Sbjct: 300 HFINQEKPQEILQIILDFISKF 321
>AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321
Length = 320
Score = 221 bits (562), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 182/321 (56%), Gaps = 12/321 (3%)
Query: 6 VRHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMXXXXXXXXXXXXPDLRG 65
+ H N NGI +HVA QGP+DG VLL+HGFPELW SWRHQ+ PDLRG
Sbjct: 1 MEHRNVRGNGIDIHVAIQGPSDGTIVLLLHGFPELWYSWRHQISGLAARGYRAVAPDLRG 60
Query: 66 YGDSTVPDDPAAYTVFHIVGDLVALLDHLAL--PKVMVVGHDLGAQVAWHLCLFRPDMLL 123
YGDS P + +++T F+IVGDLVA++ L KV VVGHD GA +AW+LCLFRPD +
Sbjct: 61 YGDSDAPAEISSFTCFNIVGDLVAVISTLIKEDKKVFVVGHDWGALIAWYLCLFRPDKVK 120
Query: 124 AVVNLGVP--FFPRGPS----SLSEAFAGRDGLYIMQFQEPGRAERAFARYDVATVLKKF 177
A+VNL VP F+P PS A G D Y+ +FQE G E A V+K+
Sbjct: 121 ALVNLSVPLSFWPTDPSVKPVDRMRAVYGND-YYVCRFQEVGDIEAEIAEVGTERVMKRL 179
Query: 178 FSIEIDDLTAPPGVEIIDFLEARSTPLP-WISEEELGQYAEKFQKSGFTGPINYYRMMDT 236
+ P + + + PLP W++EE++ + KF++ GF GP+NYYR +
Sbjct: 180 LTYRTPGPLIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFKEKGFCGPVNYYRNFNR 239
Query: 237 NWRLTAPWQNAKIMVPTKFICGDKDTGLKSFGTEHFVKSGAFKSVVPNLEV-VIIEG-HH 294
N L PW +KI VPTKF+ G+ D G + ++ FK VP +E V++EG H
Sbjct: 240 NNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLIEEPVVMEGVAH 299
Query: 295 FIQQEQAERVNSEILSYFDKF 315
F+ QE+ + + IL + F
Sbjct: 300 FLNQEKPQEILQIILDFISTF 320
>AT5G53050.2 | chr5:21510534-21513432 REVERSE LENGTH=397
Length = 396
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 62 DLRGYGDSTVPDDPAAYTVFHIVGDLVALLDHLALPKVMVVGHDLGAQVAWHLCLFRPDM 121
D RG G S+VP + YT + D ++LLDHL K ++GH +GA +A L P+
Sbjct: 85 DNRGMGRSSVPTHKSEYTTTIMANDSISLLDHLGWKKAHIIGHSMGAMIACKLAAMAPER 144
Query: 122 LLAVVNLGV 130
+L++ L V
Sbjct: 145 VLSLALLNV 153
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.140 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,293,681
Number of extensions: 303424
Number of successful extensions: 573
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 548
Number of HSP's successfully gapped: 8
Length of query: 320
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 221
Effective length of database: 8,392,385
Effective search space: 1854717085
Effective search space used: 1854717085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)