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Os12g0629300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Thaumatin-like protein precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.9 (0.077) R2 : 0.476
β1 : -1.55 (0.299) R2dD : 0.0471 R2D : 0.105
β2 : -- (--) R2dC : -- R2C : --
β3 : 7.4 (0.477) R2dE : 0.556 R2E : 0.136
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 16.8 (1.35) R2dD*E : 0.352 R2D*E : -0.275
γ1 : 0.418 (0.157) R2dN8 : 0.013 R2N8 : -0.0266
σ : 1.26
deviance : 732.52
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_____
C
peak time of C : --
E
wheather : wind
threshold : 5.472
memory length : 10436
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 6.59
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
735.45 1.27 6.89 -1.58 0.0335 6.96 0.482 15.6 0.395 10.1 4.984 10526 7.06 --
940.46 1.43 6.57 -0.386 0.222 4.91 0.688 -- 0.358 11.1 5.1 9692 10 --
732.74 1.26 6.89 -1.55 0.00506 7.38 -- 16.5 0.427 19.5 5.453 10439 6.57 --
926.43 1.42 6.53 -0.602 0.0186 4.42 -- -- 0.551 19.2 5.4 10474 10.1 --
732.52 1.26 6.9 -1.55 -- 7.4 -- 16.8 0.418 -- 5.472 10436 6.59 --
1166.68 1.6 6.6 -2.82 0.0108 -- 0.853 -- 0.187 15 -- -- -- --
1168.84 1.6 6.6 -2.8 0.0708 -- -- -- 0.192 19.9 -- -- -- --
923.19 1.42 6.5 -0.607 -- 4.37 -- -- 0.632 -- 5.4 11031 10 --
929.78 1.42 6.52 -- 0.039 4.69 -- -- 0.673 19 5.4 11062 10.4 --
1169.12 1.6 6.6 -2.8 -- -- -- -- 0.191 -- -- -- -- --
1375.87 1.74 6.53 -- 0.104 -- -- -- 0.504 17.9 -- -- -- --
929.06 1.42 6.48 -- -- 4.78 -- -- 0.721 -- 5.442 11031 10.1 --
1376.43 1.73 6.53 -- -- -- -- -- 0.502 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 771.59 wind 9 14400 > th dose dependent sin 13 NA
2 774.29 wind 9 14400 > th dose dependent rect. 14 18
9 777.63 wind 7 4320 < th dose independent rect. 19 2
10 777.73 wind 9 14400 > th dose dependent rect. 14 7
12 779.90 wind 5 4320 > th dose dependent rect. 20 1
13 781.13 wind 7 4320 > th dose independent rect. 19 2
18 782.43 wind 9 14400 > th dose independent sin 13 NA
21 782.92 wind 9 14400 > th dose dependent rect. 14 11
24 783.32 wind 7 4320 > th dose independent rect. 17 4
27 783.64 wind 9 14400 > th dose dependent rect. 18 11
30 785.25 wind 9 14400 > th dose independent rect. 18 11
32 787.68 atmosphere 1000 14400 < th dose dependent rect. 8 1
40 789.43 atmosphere 1000 14400 < th dose dependent rect. 6 6
47 789.69 atmosphere 1000 14400 < th dose dependent rect. 6 15
52 789.76 atmosphere 1000 14400 < th dose dependent rect. 6 10
55 789.80 atmosphere 1000 14400 < th dose dependent rect. 6 13
83 790.25 wind 9 14400 < th dose independent sin 13 NA
91 790.33 atmosphere 1000 14400 < th dose dependent sin 0 NA
130 790.78 wind 9 14400 < th dose independent rect. 18 12
138 790.82 atmosphere 1000 14400 < th dose dependent rect. 24 21
177 791.12 atmosphere 1000 14400 < th dose dependent rect. 17 23
179 791.14 atmosphere 1000 14400 < th dose dependent rect. 20 23
180 791.15 atmosphere 1000 14400 < th dose dependent rect. 14 23
189 791.20 atmosphere 1000 14400 < th dose dependent no NA NA
208 791.30 atmosphere 1000 14400 < th dose dependent rect. 11 23
214 791.34 atmosphere 1000 14400 < th dose dependent rect. 20 20
247 791.50 atmosphere 1000 14400 < th dose dependent rect. 15 1
311 791.98 atmosphere 1000 14400 < th dose dependent rect. 14 7
321 792.03 atmosphere 1000 14400 < th dose dependent rect. 11 1
340 792.20 atmosphere 1000 14400 < th dose dependent rect. 14 5
341 792.21 atmosphere 1000 14400 < th dose dependent rect. 13 13
422 792.71 atmosphere 1000 14400 < th dose dependent rect. 20 1
473 793.39 atmosphere 1000 14400 < th dose dependent rect. 17 1
491 793.63 atmosphere 1000 14400 < th dose dependent rect. 24 1
512 793.97 wind 9 14400 > th dose independent rect. 18 7
516 794.01 atmosphere 1000 14400 < th dose independent rect. 24 1
528 794.14 atmosphere 1000 14400 > th dose independent rect. 1 1
529 794.14 atmosphere 1000 14400 < th dose independent rect. 23 4
537 794.18 atmosphere 1000 14400 < th dose dependent rect. 20 6
544 794.27 atmosphere 1000 14400 > th dose independent rect. 23 4
552 794.32 wind 9 14400 > th dose dependent rect. 18 5
589 794.73 wind 9 14400 > th dose dependent rect. 18 8
682 796.10 wind 9 14400 > th dose independent rect. 18 16
694 796.20 atmosphere 1000 14400 < th dose independent rect. 17 10
696 796.22 atmosphere 1005 14400 > th dose independent rect. 6 1
698 796.24 atmosphere 1000 14400 > th dose independent rect. 17 10
711 796.39 wind 7 14400 > th dose independent rect. 14 20
772 797.20 wind 9 14400 < th dose independent rect. 18 8
803 797.53 wind 9 14400 < th dose independent rect. 18 16
871 798.30 atmosphere 1000 14400 < th dose independent rect. 17 1
876 798.41 atmosphere 1000 14400 < th dose independent sin 13 NA
879 798.43 atmosphere 1000 14400 > th dose independent sin 13 NA
923 798.78 atmosphere 1005 14400 < th dose independent rect. 5 2
994 799.46 atmosphere 1000 14400 > th dose independent rect. 17 1