BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0629300 Os12g0629300|Os12g0629300
(174 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245 127 3e-30
AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357 120 5e-28
AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247 110 3e-25
AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247 107 4e-24
AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240 101 2e-22
AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265 100 5e-22
AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245 97 5e-21
AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666 96 1e-20
AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317 94 4e-20
AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261 93 7e-20
AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421 92 2e-19
AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331 92 2e-19
AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302 91 3e-19
AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248 91 3e-19
AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346 90 6e-19
AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295 90 7e-19
AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254 87 6e-18
AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250 86 1e-17
AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282 83 8e-17
AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257 82 1e-16
AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800 80 4e-16
AT4G18250.1 | chr4:10087343-10091963 REVERSE LENGTH=854 52 2e-07
>AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245
Length = 244
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 79/116 (68%), Gaps = 5/116 (4%)
Query: 27 FTITNQCPYTVWPAATPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGAGTGSCA 86
F I NQC YTVW AA+P GGG +L+ G +W +DV AGT R+WGRT C+F+ +G G C
Sbjct: 25 FEILNQCSYTVWAAASP-GGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQ 83
Query: 87 TGDCAGALSCTLSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSFSCSS 142
TGDC+G L CT GQ P TLAE+ L LDFYD+S++DGFN+ M FS +S
Sbjct: 84 TGDCSGGLQCTGWGQPPNTLAEYAL----NQFNNLDFYDISLVDGFNIPMEFSPTS 135
>AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357
Length = 356
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 12/123 (9%)
Query: 26 IFTITNQCPYTVWPAATP----VGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGAG 81
+FTI N C T+WPA TP GGG +L PG + P G S GR+WGRTGC F+ G
Sbjct: 90 VFTIINSCDQTIWPAITPGENFNGGGFELKPGQSIVFHAPVGWS-GRIWGRTGCKFDSTG 148
Query: 82 TGSCATGDCAGALSCTLSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSFSCS 141
TG+C TG C L C+ SG+ P +LAEFTLA LDFYDVS++DGFN+ MS +
Sbjct: 149 TGTCETGSCGSTLKCSASGKPPASLAEFTLAA-------LDFYDVSLVDGFNLPMSVTPM 201
Query: 142 SGE 144
+G+
Sbjct: 202 NGK 204
>AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247
Length = 246
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 26 IFTITNQCPYTVWPAA------TPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
+FT+ N CPYTVWP T GG L PG + + PAG S GR W RTGC+F+
Sbjct: 26 VFTLQNSCPYTVWPGILSGNDNTLGDGGFPLTPGASVQLTAPAGWS-GRFWARTGCNFDA 84
Query: 80 AGTGSCATGDCAGALSCTLSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSFS 139
+G G+C TGDC G L C G P+TLAEFTL G G DFYDVS++DG+NV M
Sbjct: 85 SGHGNCGTGDCGGVLKCNGGGVPPVTLAEFTLVGDGG----KDFYDVSLVDGYNVEMGIK 140
Query: 140 -------CSSGETLTCRDSCCPDNTKL 159
C + ++ CP+ +L
Sbjct: 141 PQGGSGDCHYAGCVADVNAVCPNELRL 167
>AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247
Length = 246
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 26 IFTITNQCPYTVWP------AATPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
+FT+ N C YTVWP + T GG L PG + + P G S GR W RTGC+F+
Sbjct: 25 VFTLQNSCAYTVWPGTLSGNSITLGDGGFPLTPGASVQLTAPTGWS-GRFWARTGCNFDA 83
Query: 80 AGTGSCATGDCAGALSCTLSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSF- 138
+G G+C TGDC G L CT G P TLAEFT+ S G +DFYDVS++DG+NV M
Sbjct: 84 SGHGTCVTGDCGGVLKCTGGGVPPATLAEFTVGSSNAG---MDFYDVSLVDGYNVKMGIK 140
Query: 139 ------SCSSGETLTCRDSCCPDNTKLRHCNANS 166
+C ++ + CP ++ N+ S
Sbjct: 141 PQGGFGNCKYAGCVSDINEICPSELRIMDPNSGS 174
>AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240
Length = 239
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 83/151 (54%), Gaps = 21/151 (13%)
Query: 27 FTITNQCPYTVWPAATPVG-------GGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
FT+ N CP TVW A T G GG +L PG + + PAG S GR W RTGC+F+
Sbjct: 26 FTLRNNCPTTVW-AGTLAGQGPKLGDGGFELTPGASRQLTAPAGWS-GRFWARTGCNFDA 83
Query: 80 AGTGSCATGDCAGALSCTLSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNV----- 134
+G G C TGDC G L C G P+TLAEFTL G G DFYDVS++DG+NV
Sbjct: 84 SGNGRCVTGDC-GGLRCNGGGVPPVTLAEFTLVGDGGK----DFYDVSLVDGYNVKLGIR 138
Query: 135 --GMSFSCSSGETLTCRDSCCPDNTKLRHCN 163
G S C ++ ++ CPD K+ N
Sbjct: 139 PSGGSGDCKYAGCVSDLNAACPDMLKVMDQN 169
>AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265
Length = 264
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 15/116 (12%)
Query: 31 NQCPYTVWPAATP-------VGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGAGTG 83
N+C YTVWP P GGG +L+P +T+ +P SGR WGR GCSF+ +G G
Sbjct: 48 NKCTYTVWPGIQPSSGQSLLAGGGFKLSPNRAYTLQLPP-LWSGRFWGRHGCSFDRSGRG 106
Query: 84 SCATGDCAGALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSF 138
CATGDC G+ C G P TLAE TL +DFYDVS++DG+N+ MS
Sbjct: 107 RCATGDCGGSFLCNGAGGVPPATLAEITLG------HDMDFYDVSLVDGYNLAMSI 156
>AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245
Length = 244
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 22/148 (14%)
Query: 31 NQCPYTVWPAATP-------VGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGAGTG 83
N+C + VWP P GGG +L ++ +P SGR WGR GC+F+ +G G
Sbjct: 28 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPP-LWSGRFWGRHGCTFDRSGRG 86
Query: 84 SCATGDCAGALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSF---- 138
CATGDC G+LSC G+ P TLAE TL +LDFYDVS++DG+N+ MS
Sbjct: 87 HCATGDCGGSLSCNGAGGEPPATLAEITLG------PELDFYDVSLVDGYNLAMSIMPVK 140
Query: 139 ---SCSSGETLTCRDSCCPDNTKLRHCN 163
CS ++ + CP ++R N
Sbjct: 141 GSGQCSYAGCVSDLNQMCPVGLQVRSRN 168
>AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666
Length = 665
Score = 95.5 bits (236), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 23/151 (15%)
Query: 27 FTITNQCPYTVWP-------AATPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
FTI N+C YTVWP A + G L G++ I+VP + SGR+WGR+ CS +
Sbjct: 27 FTIENKCDYTVWPGFLTMTTAVSLPTNGFSLKKGESRVINVPP-SWSGRLWGRSFCSTSS 85
Query: 80 AGTGSCATGDC-AGALSCTLSGQK-PLTLAEFTLAGSAGGSQQLDFYDVSVIDGFN---- 133
G SCATGDC +G + C+ SG + P TL +FTL + G DFYDVSV+DG+N
Sbjct: 86 TGNFSCATGDCGSGKIECSDSGARPPTTLIDFTLDATDGQ----DFYDVSVVDGYNLPLV 141
Query: 134 -----VGMSFSCSSGETLTCRDSCCPDNTKL 159
+G +CS+ + + CP K+
Sbjct: 142 VVPQRLGSGRTCSNVGCVVNLNKTCPSELKV 172
>AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317
Length = 316
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Query: 27 FTITNQCPYTVWPAATPVGG-------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
FT +N+C YTVWP G G L G+T TI+ P+ + GR WGRT CS +
Sbjct: 22 FTFSNKCDYTVWPGILSNAGVSPLPTTGFVLLKGETRTINAPS-SWGGRFWGRTLCSTDS 80
Query: 80 AGTGSCATGDC-AGALSCTLSGQK-PLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
G SCATGDC +G + C+ +G P TLAEFTL GS G LDFYDVS++DG+NV M
Sbjct: 81 DGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGG----LDFYDVSLVDGYNVQM 135
>AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261
Length = 260
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 28 TITNQCPYTVWPAATPVGG-------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG- 79
TI N+C +TVWP G G +L PG + + PA + SGR W RTGC+FN
Sbjct: 36 TIVNRCSFTVWPGILSNSGSGDIGTTGFELVPGGSRSFQAPA-SWSGRFWARTGCNFNSD 94
Query: 80 AGTGSCATGDC-AGALSCTLSGQKP-LTLAEFTL-AGSAGGSQQLDFYDVSVIDGFNVGM 136
G G+C TGDC + + C +G KP TLAEFT+ +G A +++ DFYDVS++DG+NV M
Sbjct: 95 TGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTIGSGPADPARKQDFYDVSLVDGYNVPM 154
Query: 137 SFSCSSGETLTCRDSCC 153
S G TC + C
Sbjct: 155 LVEASGGSEGTCLTTGC 171
>AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421
Length = 420
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 27 FTITNQCPYTVWPAATPVGGGVQLNPGDTWTIDVPAGTS-------SGRVWGRTGCSFNG 79
F ITN CP+T+WP T G G Q P + +DV SGR+W RTGC+F+
Sbjct: 27 FVITNNCPFTIWPG-TLAGSGTQPLPTTGFRLDVGQSVRIPTALGWSGRIWARTGCNFDA 85
Query: 80 AGTGSCATGDCAGALSCTLSGQKPLT-LAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
G G C TGDC G L C +G P T L E TL GS DFYDVS++DG+N+ +
Sbjct: 86 NGAGKCMTGDCGGKLECAGNGAAPPTSLFEITL---GHGSDDKDFYDVSLVDGYNLPI 140
>AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331
Length = 330
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 74/136 (54%), Gaps = 14/136 (10%)
Query: 27 FTITNQCPYTVWPAATPVGG-------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
F + N+C YTVWP G G L G+ TI P + GR WGRT CS +
Sbjct: 25 FIMVNKCEYTVWPGLLSNAGVPPLPTTGFVLQKGEERTISAPT-SWGGRFWGRTQCSTDT 83
Query: 80 AGTGSCATGDC-AGALSCTLSGQ-KPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMS 137
G +C TGDC +G L C+ SG P TLAEFTL GS G LDFYDVS++DG+NV M
Sbjct: 84 DGKFTCLTGDCGSGTLECSGSGATPPATLAEFTLDGSNG----LDFYDVSLVDGYNVPML 139
Query: 138 FSCSSGETLTCRDSCC 153
+ G L C + C
Sbjct: 140 VAPQGGSGLNCSSTGC 155
>AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302
Length = 301
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 27 FTITNQCPYTVWPAATPVGG-------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
FTI NQC YTVWP G G LNP +T I +PA S GR+WGRT C+ +
Sbjct: 25 FTIVNQCSYTVWPGLLSGAGTSPLPTTGFSLNPTETRVIPIPAAWS-GRIWGRTLCTQDA 83
Query: 80 A-GTGSCATGDC-AGALSCTLSGQKP-LTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
G +C TGDC + + C+ SG P TLAEFTL G+ G LDFYDVS++DG+N+ M
Sbjct: 84 TTGRFTCITGDCGSSTVECSGSGAAPPATLAEFTLNGANG----LDFYDVSLVDGYNIPM 139
Query: 137 SF 138
+
Sbjct: 140 TI 141
>AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248
Length = 247
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 27 FTITNQCPYTVWPAATPVGG------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGA 80
FT+TN C T+WP G G L G + T V G S GR W RT C+F+ +
Sbjct: 28 FTLTNHCGSTIWPGILTANGAQLGDGGFALASGSSVTFTVSPGWS-GRFWARTYCNFDAS 86
Query: 81 GTGSCATGDCAGALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSFS 139
G+G C TGDC L C G P TLAEFT+ S + DFYDVS++DG+NV M +
Sbjct: 87 GSGKCGTGDCGSKLKCAGAGGAPPATLAEFTIGSSGKKNAVQDFYDVSLVDGYNVQMKIT 146
>AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346
Length = 345
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 15/119 (12%)
Query: 27 FTITNQCPYTVWPAATPVGG-------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
FT N+C YTVWP G G +L G + ++ P G S GR W RTGC F+
Sbjct: 32 FTFANRCGYTVWPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWS-GRFWARTGCKFDS 90
Query: 80 AGTGSCATGDC-AGALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
+G+G+C TGDC + A+ C L P+TLAEFTL G+ DFYDVS++DG+N+ M
Sbjct: 91 SGSGTCKTGDCGSNAVECAGLGAAPPVTLAEFTL-----GTGGDDFYDVSLVDGYNIPM 144
>AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295
Length = 294
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
Query: 27 FTITNQCPYTVWP-------AATPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
I N C ++WP TP GG + G+ IDVP SGR+WGR GC+FN
Sbjct: 23 LIIVNNCQESIWPGILGGGGQITPRNGGFHMGSGEETIIDVP-DKWSGRIWGRQGCTFNQ 81
Query: 80 AGTGSCATGDCA-GALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMS 137
G GSC TGDC G+++C G P T+ E TL S S L FYDVS++DGFN+ +S
Sbjct: 82 NGKGSCQTGDCNDGSINCQGTGGVPPATVVEMTLGSS---SSPLHFYDVSLVDGFNLPVS 138
Query: 138 FS 139
Sbjct: 139 MK 140
>AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254
Length = 253
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 27 FTITNQCPYTVWPAATPVGG-------GVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
FTI NQC YTVWP G G LN ++ I +PA S GR+WGRT C+ N
Sbjct: 25 FTIVNQCNYTVWPGLLSGAGTAPLPTTGFSLNSFESRLISIPAAWS-GRIWGRTLCNQNE 83
Query: 80 -AGTGSCATGDCAGA-LSCTLSGQ-KPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
G +C TGDC + + C+ +G P TLAEFTL G++ LDFYDVS++DG+N+ M
Sbjct: 84 ITGIFTCVTGDCGSSQIECSGAGAIPPATLAEFTL----NGAENLDFYDVSLVDGYNIPM 139
Query: 137 SF 138
+
Sbjct: 140 TI 141
>AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250
Length = 249
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 75/150 (50%), Gaps = 18/150 (12%)
Query: 26 IFTITNQCPYTVWPAATPVGGGVQLNPG----DTWT---IDVPAGTSSGRVWGRTGCSFN 78
T+ N CP+TVWPA P G L G T+T +VP SGR+W RT C+ +
Sbjct: 28 FLTVVNNCPFTVWPAIQPNAGHPVLEKGGFALPTFTHRSFNVPTTHWSGRIWARTWCA-H 86
Query: 79 GAGTGSCATGDCAGALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMS 137
G SC TGDC L C L G P +LA+F L GG Y VS++DG+NV M+
Sbjct: 87 YNGKFSCLTGDCGNRLECNGLGGAPPASLAQFDL--HHGGHHDFSSYGVSLVDGYNVPMT 144
Query: 138 FSCSSGE----TLTCRD---SCCPDNTKLR 160
+ G + CR+ CP + ++R
Sbjct: 145 VTPHEGHGVCPVVGCREDLIKTCPAHLQVR 174
>AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282
Length = 281
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 75/120 (62%), Gaps = 15/120 (12%)
Query: 27 FTITNQCPYTVWP-------AATPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFN- 78
F ITN+C T+WP +A G +L+ G + T+ +P + SGR+W RT CS +
Sbjct: 25 FKITNRCRNTIWPGLLSGANSAPLPTTGFRLSRGKSKTVAIPE-SWSGRLWARTLCSQDR 83
Query: 79 GAGTGSCATGDC-AGALSCTLSGQKP-LTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
+G+ C TGDC +G + C+ SG KP TLAEFTL G+ G LDFYDVS++DG+N+ M
Sbjct: 84 SSGSFVCLTGDCGSGKVECSGSGAKPPATLAEFTLNGTGG----LDFYDVSLVDGYNLPM 139
>AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257
Length = 256
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 27 FTITNQCPYTVWPAATP-------VGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNG 79
F + N+C + +WPA P GG L G ID P G S GR+W RTGC F
Sbjct: 30 FYVQNKCSFPIWPAVAPNSGHPVLASGGFYLPCGGIKRIDAPLGWS-GRIWARTGCDFTS 88
Query: 80 AGTGSCATGDCAGALSCT-LSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNV 134
+C TGDC G L C L G+ P TL + + + +FYDVS++DG+N+
Sbjct: 89 NSKQACETGDCDGHLECNGLIGKPPATLIQIAVQAD---KSKPNFYDVSLVDGYNL 141
>AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800
Length = 799
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 27 FTITNQCPYTVWPAA-----TPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGAG 81
FTI N+C YT+WPA + G L G+T TI P+ + GR WGRT CS N G
Sbjct: 147 FTIENKCQYTIWPATYGYRRSLETTGFVLEKGETRTIKAPS-SWIGRFWGRTLCSTNSTG 205
Query: 82 TGSCATGDC-AGALSCTLSGQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSFS- 139
SCATGDC +G + C P T+ EF LA S +D+Y V+V +G+N+ + +
Sbjct: 206 GFSCATGDCTSGKIKCLGIPIDPTTVVEFNLA-----SYGVDYYVVNVFNGYNLPLLVTP 260
Query: 140 ----CSSGETLTCRDSCCP 154
C S E + + CP
Sbjct: 261 ENKNCRSIECVIDMNETCP 279
>AT4G18250.1 | chr4:10087343-10091963 REVERSE LENGTH=854
Length = 853
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 28/155 (18%)
Query: 26 IFTITNQCPYTVWPAATPVGGGVQLNP-------GDTWTIDVPAGTSSGRVWGRTGCSFN 78
I TI N+C +TVWP Q++P G+ + P+ + G + RT CS +
Sbjct: 11 ILTIENKCNHTVWPVIFSWNVDSQVSPTGFALRRGEARALQAPS-SWYGLISARTLCSID 69
Query: 79 GAGTGSCATGDC-AGALSCTLS-GQKPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGM 136
GT SCATGDC +G + C + G P+T F +++ Y +SV G+N+ +
Sbjct: 70 STGTFSCATGDCESGTIECPGNYGWAPVTYVYF----------RMNSYTISVEYGYNLPL 119
Query: 137 -------SFSC-SSGETLTCRDSCCPDNTKLRHCN 163
S +C S+G + + +C D K+ N
Sbjct: 120 MVVPSQRSRTCISAGCVVELKKTCPKDLMKMSREN 154
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 26 IFTITNQCPYTVWPA-----ATPVGGGVQLNPGDTWTIDVPAGTSSGRVWGRTGCSFNGA 80
I TI N+C T+WP + G L G+ I+ P+ + G + RT CS +
Sbjct: 222 IITIENKCNNTIWPVIFSWRSQVSTTGFTLKTGEERAINAPS-SWYGLISARTLCSNDST 280
Query: 81 GTGSCATGDC-AGALSCTLSGQ-KPLTLAEFTLAGSAGGSQQLDFYDVSVIDGFNVGMSF 138
G SCATGDC +G + C + + P+T F + Q++ Y +S+ G+N+ ++
Sbjct: 281 GNFSCATGDCESGEIECPGTYKWSPVTYVIFRIDDG-----QINSYIISLEFGYNLPLTV 335
Query: 139 -----SCSSGETLTCRDSCCPDNTK 158
+C S + + CP++ K
Sbjct: 336 VPSNPACISSGCMVDLNKTCPNDLK 360
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,662,692
Number of extensions: 158949
Number of successful extensions: 469
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 411
Number of HSP's successfully gapped: 23
Length of query: 174
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 82
Effective length of database: 8,584,297
Effective search space: 703912354
Effective search space used: 703912354
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)