Os12g0625000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O- acetylserine (Thiol)-lyase) (CSase) (OAS-TL).
FiT-DB / Search/ Help/ Sample detail
|
Os12g0625000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O- acetylserine (Thiol)-lyase) (CSase) (OAS-TL).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.07 | 0.376 | 14.4 | -0.717 | 0.736 | -1.07 | -0.171 | 4.97 | -0.633 | 20.3 | 26.29 | 2825 | -- | -- |
| 64.11 | 0.373 | 14.4 | -1.41 | 0.705 | -0.878 | -0.125 | -- | -0.532 | 20.1 | 20.7 | 25016 | -- | -- |
| 64.14 | 0.373 | 14.4 | -0.706 | 0.737 | -1.08 | -- | 5.03 | -0.63 | 20.4 | 26.31 | 2775 | -- | -- |
| 64.13 | 0.373 | 14.4 | -1.4 | 0.697 | -0.881 | -- | -- | -0.526 | 20.2 | 20.66 | 25060 | -- | -- |
| 93.44 | 0.45 | 14.4 | -1.14 | -- | -0.885 | -- | 3.4 | -0.706 | -- | 25.9 | 2979 | -- | -- |
| 81.92 | 0.424 | 14.5 | -2.18 | 0.683 | -- | -0.162 | -- | -0.901 | 20 | -- | -- | -- | -- |
| 81.99 | 0.424 | 14.5 | -2.18 | 0.682 | -- | -- | -- | -0.901 | 20 | -- | -- | -- | -- |
| 90.1 | 0.442 | 14.4 | -1.39 | -- | -0.87 | -- | -- | -0.539 | -- | 20.39 | 25957 | -- | -- |
| 73.72 | 0.4 | 14.3 | -- | 0.694 | -1.8 | -- | -- | -0.0866 | 20.2 | 15.1 | 47520 | -- | -- |
| 107.43 | 0.484 | 14.5 | -2.19 | -- | -- | -- | -- | -0.91 | -- | -- | -- | -- | -- |
| 207.2 | 0.673 | 14.5 | -- | 0.697 | -- | -- | -- | -0.658 | 19.8 | -- | -- | -- | -- |
| 100.3 | 0.466 | 14.3 | -- | -- | -1.8 | -- | -- | -0.0954 | -- | 15.06 | 47520 | -- | -- |
| 233.51 | 0.713 | 14.4 | -- | -- | -- | -- | -- | -0.667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.90 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 2 | 59.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 5 | 60.05 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 8 | 60.14 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 12 | 60.17 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 17 | 60.19 | radiation | 10 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 19 | 60.19 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 6 |
| 21 | 60.20 | radiation | 10 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 24 | 60.25 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 26 | 60.28 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 27 | 60.28 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 30 | 60.29 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 34 | 60.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 35 | 60.31 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 57 | 60.37 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 64 | 60.49 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 65 | 60.50 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 66 | 60.50 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 71 | 60.51 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 82 | 60.59 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 84 | 60.61 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 90 | 60.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 91 | 60.68 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 94 | 60.70 | radiation | 40 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 101 | 60.72 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 102 | 60.73 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 104 | 60.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 108 | 60.75 | radiation | 40 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 141 | 60.85 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 154 | 60.86 | radiation | 40 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 171 | 60.94 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 183 | 60.94 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 202 | 60.99 | temperature | 20 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 203 | 60.99 | radiation | 10 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 260 | 61.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 273 | 61.30 | temperature | 20 | 43200 | < th | dose dependent | rect. | 10 | 14 |
| 278 | 61.32 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 282 | 61.33 | temperature | 20 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 288 | 61.35 | radiation | 20 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 296 | 61.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 299 | 61.39 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 315 | 61.44 | temperature | 20 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 330 | 61.49 | temperature | 20 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 334 | 61.50 | temperature | 20 | 43200 | < th | dose dependent | sin | 19 | NA |
| 342 | 61.52 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 387 | 61.64 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 418 | 61.78 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 425 | 61.80 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 442 | 61.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 453 | 61.89 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 475 | 61.91 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 479 | 61.93 | temperature | 20 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 484 | 61.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 498 | 61.96 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 520 | 62.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 523 | 62.05 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 532 | 62.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 535 | 62.07 | temperature | 25 | 1440 | < th | dose independent | rect. | 21 | 12 |
| 545 | 62.10 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 573 | 62.18 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 9 |
| 576 | 62.19 | temperature | 15 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 605 | 62.26 | temperature | 15 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 647 | 62.31 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 656 | 62.32 | temperature | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 668 | 62.34 | temperature | 20 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 669 | 62.34 | temperature | 20 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 670 | 62.34 | temperature | 20 | 43200 | < th | dose dependent | rect. | 20 | 23 |
| 678 | 62.35 | temperature | 20 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 683 | 62.36 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 698 | 62.38 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 759 | 62.44 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 771 | 62.46 | humidity | 80 | 43200 | > th | dose dependent | rect. | 13 | 15 |
| 911 | 62.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 932 | 62.70 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 979 | 62.77 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 1 |