BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0625000 Os12g0625000|AK099598
(321 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323 502 e-142
AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306 470 e-133
AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393 452 e-127
AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434 448 e-126
AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325 419 e-117
AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324 419 e-117
AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324 399 e-111
AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369 377 e-105
AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405 375 e-104
AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422 120 1e-27
>AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323
Length = 322
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/321 (75%), Positives = 274/321 (85%)
Query: 1 MGETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEK 60
M IAKDVTELIGNTPLVYLN V +GCVGRVAAKLE MEPCSSVKDRIG+SMI+DAE+K
Sbjct: 1 MASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKK 60
Query: 61 GLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTD 120
GLI PG+SVLIEPTSGNTG+GLAF AAAKGY+L++TMPASMS ERRIIL AFG EL+LTD
Sbjct: 61 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTD 120
Query: 121 PLLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXX 180
P GMKGA+ KAEE+ AKT N ++LQQFENPANPKIHYETTGPEIWKGTGGK+DG VS
Sbjct: 121 PAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGI 180
Query: 181 XXXXXXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLI 240
+YL+EQN ++K+YGVEPVESA+LSGGKPGPHKIQGIGAGF+P VL+VDLI
Sbjct: 181 GTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLI 240
Query: 241 NETVQVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGE 300
+E VQVSSDE+I+MA+ LALKEGLLVGISSG ++LAQRPEN GKLFV +FPSFGE
Sbjct: 241 DEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGE 300
Query: 301 RYLSSVLFQSIKKEAENMVVE 321
RYLS+VLF + +KEAE M E
Sbjct: 301 RYLSTVLFDATRKEAEAMTFE 321
>AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306
Length = 305
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/317 (73%), Positives = 261/317 (82%), Gaps = 20/317 (6%)
Query: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64
IAKDVTELIGNTPLVYLN+V CVG VAAKLE MEPCSSVKDRIGYSMI DAE KGLI
Sbjct: 8 IAKDVTELIGNTPLVYLNKVAKDCVGHVAAKLEMMEPCSSVKDRIGYSMIADAEAKGLIK 67
Query: 65 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124
PG+SVLIEPTSGNTG+GLAF AAAKGY+LV+TMPASMS+ERRIIL AFGAELILTDP G
Sbjct: 68 PGESVLIEPTSGNTGVGLAFTAAAKGYKLVITMPASMSIERRIILLAFGAELILTDPAKG 127
Query: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXXX 184
MKGAV KAEE+ AKT N ++LQQFENPANPKIHYETTGPEIWKG G
Sbjct: 128 MKGAVAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGAG-------------- 173
Query: 185 XXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETV 244
+YL+EQN +IK+YGVEPVES +LSGGKPGPHKIQGIGAGF+PG+LDVDLI+E V
Sbjct: 174 ------KYLKEQNTNIKLYGVEPVESPILSGGKPGPHKIQGIGAGFIPGILDVDLIDEVV 227
Query: 245 QVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYLS 304
QVSS+E+I+MA+ LA +EGLLVGISSG ++LA+RPEN GKL V VFPSFGERYLS
Sbjct: 228 QVSSEESIDMARLLAREEGLLVGISSGAAATAAIKLAKRPENAGKLIVAVFPSFGERYLS 287
Query: 305 SVLFQSIKKEAENMVVE 321
+VLF + +KEAE M E
Sbjct: 288 TVLFDAARKEAETMTFE 304
>AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393
Length = 392
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/317 (67%), Positives = 260/317 (82%)
Query: 2 GETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKG 61
G IA + +LIG TP+VYLN V GCV VAAKLE MEPC SVKDRIGYSMITDAEEKG
Sbjct: 72 GLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKG 131
Query: 62 LITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDP 121
LITPGKSVL+E TSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++L+AFGAEL+LT+P
Sbjct: 132 LITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEP 191
Query: 122 LLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXX 181
GM GA+QKAEE+ KT NS++LQQF+NPANPKIHYETTGPEIW+ T GK+D LV+
Sbjct: 192 AKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIG 251
Query: 182 XXXXXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLIN 241
R+++E+ P++K+ GVEP ESA+LSGGKPGPHKIQGIGAGFVP LD+ +++
Sbjct: 252 TGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVD 311
Query: 242 ETVQVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGER 301
E + +SS+EAIE +K LAL+EGLLVGISSG +++A+RPEN GKL VVFPSFGER
Sbjct: 312 EYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGER 371
Query: 302 YLSSVLFQSIKKEAENM 318
YLS+ LFQSI++E E M
Sbjct: 372 YLSTQLFQSIREECEQM 388
>AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434
Length = 433
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/317 (66%), Positives = 256/317 (80%)
Query: 2 GETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKG 61
G IA +V++LIG TP+VYLN + GCV +AAKLE MEPC SVKDRIGYSM+TDAE+KG
Sbjct: 110 GLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKG 169
Query: 62 LITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDP 121
I+PGKSVL+EPTSGNTGIGLAF+AA++GYRL+LTMPASMSMERR++LKAFGAEL+LTDP
Sbjct: 170 FISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229
Query: 122 LLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXX 181
GM GAVQKAEE+ T ++++LQQF+NPANPKIHYETTGPEIW T GKVD V+
Sbjct: 230 AKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIG 289
Query: 182 XXXXXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLIN 241
R+++E+NP ++ GVEP ES +LSGGKPGPHKIQGIGAGF+P LD +++
Sbjct: 290 TGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMD 349
Query: 242 ETVQVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGER 301
E + +SS+EAIE AK LALKEGL+VGISSG +++A+RPEN GKL VVFPSFGER
Sbjct: 350 EVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGER 409
Query: 302 YLSSVLFQSIKKEAENM 318
YLS+ LFQSI++E E M
Sbjct: 410 YLSTPLFQSIREEVEKM 426
>AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325
Length = 324
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 252/318 (79%)
Query: 4 TIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLI 63
+I D T+LIGNTP+VYLN + DGCV R+AAKLE MEPCSSVK+RI Y MI DAE+KGLI
Sbjct: 7 SIKDDATQLIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKERIAYGMIKDAEDKGLI 66
Query: 64 TPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLL 123
TPGKS LIE TSGNTGIGLAF+ AAKGY++VLTMP+SMS+ER+IIL A GAE+ LTDP
Sbjct: 67 TPGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLTDPSK 126
Query: 124 GMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXX 183
G++G + KAEE+ +K +S +L+QF+NP+NP+ HY TTGPEIW+ + G+VD LV+
Sbjct: 127 GVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILVAGVGTG 186
Query: 184 XXXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINET 243
R+L+E+N D K+YGVEP ESAV+SGGKPG H IQGIGAG +P LD ++++E
Sbjct: 187 GTLSGSGRFLKEKNKDFKVYGVEPTESAVISGGKPGTHLIQGIGAGLIPDNLDFNVLDEV 246
Query: 244 VQVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYL 303
+QV+S EAIE AK LALKEGLLVGISSG +++A+RPEN GKL VV+FPS GERYL
Sbjct: 247 IQVTSVEAIETAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSGGERYL 306
Query: 304 SSVLFQSIKKEAENMVVE 321
S+ LF+S++ EAEN+ ++
Sbjct: 307 STSLFESVRHEAENLPIQ 324
>AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324
Length = 323
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/317 (64%), Positives = 251/317 (79%)
Query: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64
I D+TELIGNTP+VYLN V DGCV R+AAKLE MEPCSSVKDRI YSMI DAE+KGLIT
Sbjct: 7 IKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLIT 66
Query: 65 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124
PGKS LIEPT+GNTGIGLA M AA+GY+++L MP++MS+ERRIIL+A GAEL L+D +G
Sbjct: 67 PGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQRIG 126
Query: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXXX 184
+KG ++K E + +KT +I QQFENPANP+IHY TTGPEIW+ + GKVD LV+
Sbjct: 127 LKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186
Query: 185 XXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETV 244
++L+EQN DIK+ VEPVES VLSGG+PGPH IQGIG+G VP LD+ +++E +
Sbjct: 187 TATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLTIVDEII 246
Query: 245 QVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYLS 304
QV+ +EAIE AK LALKEGLLVGISSG +++A+RPEN GKL VVVFPS GERYLS
Sbjct: 247 QVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSGGERYLS 306
Query: 305 SVLFQSIKKEAENMVVE 321
+ LF SI+ EAEN+ +E
Sbjct: 307 TKLFDSIRYEAENLPIE 323
>AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324
Length = 323
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/317 (61%), Positives = 249/317 (78%)
Query: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64
I DVTELIGNTP+VYLN++ DGCV R+AAKLE MEPCSS+KDRI YSMI DAE+KGLIT
Sbjct: 7 IKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGLIT 66
Query: 65 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124
PGKS LIE T GNTGIGLA + A++GY+++L MP++MS+ERRIIL+A GAE+ LTD +G
Sbjct: 67 PGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTDISIG 126
Query: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXXX 184
+KG ++KA+E+ +KT +I QF NP NP+IHY TTGPEIW+ + GKVD LV+
Sbjct: 127 IKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186
Query: 185 XXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETV 244
++L+E+N DIK+ VEP ESAVLSGGKPGPH IQGIG+G +P LD+ +++E +
Sbjct: 187 TVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGKPGPHLIQGIGSGEIPANLDLSIVDEII 246
Query: 245 QVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYLS 304
QV+ +EAIE K LA+KEGLLVGISSG +++A+RPEN GKL VV+FPS GERYLS
Sbjct: 247 QVTGEEAIETTKLLAIKEGLLVGISSGASAAAALKVAKRPENVGKLIVVIFPSGGERYLS 306
Query: 305 SVLFQSIKKEAENMVVE 321
+ LF+S++ EAEN+ VE
Sbjct: 307 TELFESVRYEAENLPVE 323
>AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369
Length = 368
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/312 (57%), Positives = 231/312 (74%)
Query: 7 KDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPG 66
+D + LIG TPLV+LN+VT+GC VAAK E +P S+KDR +MI DAE+K LI PG
Sbjct: 51 RDASLLIGKTPLVFLNKVTEGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPG 110
Query: 67 KSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMK 126
K+ LIEPTSGN GI LAFMAA KGYR+++TMP+ S+ERR+ +++FGAEL+LTDP GM
Sbjct: 111 KTTLIEPTSGNMGISLAFMAAMKGYRIIMTMPSYTSLERRVTMRSFGAELVLTDPAKGMG 170
Query: 127 GAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXXXXX 186
G V+KA +L T ++F+ QQF NPAN +IH++TTGPEIW+ T G VD V
Sbjct: 171 GTVKKAYDLLDSTPDAFMCQQFANPANTQIHFDTTGPEIWEDTLGNVDIFVMGIGSGGTV 230
Query: 187 XXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETVQV 246
RYL+ +NP++KIYGVEP ES +L+GGKPGPH I G G GF P +LD+D++ ++V
Sbjct: 231 SGVGRYLKSKNPNVKIYGVEPAESNILNGGKPGPHAITGNGVGFKPEILDMDVMESVLEV 290
Query: 247 SSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYLSSV 306
SS++AI+MA+ LALKEGL+VGISSG +RLA+ PEN+GKL V + SFGERYLSSV
Sbjct: 291 SSEDAIKMARELALKEGLMVGISSGANTVAAIRLAKMPENKGKLIVTIHASFGERYLSSV 350
Query: 307 LFQSIKKEAENM 318
LF ++KEAE M
Sbjct: 351 LFDELRKEAEEM 362
>AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405
Length = 404
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/314 (57%), Positives = 237/314 (75%), Gaps = 10/314 (3%)
Query: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64
IA+DVT+LIG+TP+VYLNRVTDGC+ +AAKLESMEPC SVKDRIG SMI +AE G IT
Sbjct: 99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAIT 158
Query: 65 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124
P K+VL+EPT+GNTG+G+AF+AAAKGY+L++TMPAS+++ERR++L+A GAE++LT+P G
Sbjct: 159 PRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKG 218
Query: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXXX 184
+KGAV KA+E+ KT N+++ QQF+N AN KIH+ETTGPEIW+ T G VD V+
Sbjct: 219 LKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGG 278
Query: 185 XXXXXXRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETV 244
+L+ N DIK+ GVEP E +V+SG P G++PG+LDV L++E
Sbjct: 279 TVTGTGGFLKMMNKDIKVVGVEPSERSVISGDNP----------GYLPGILDVKLLDEVF 328
Query: 245 QVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYLS 304
+VS+ EAIEMA+ LAL+EGLLVGISSG V LA+R EN GKL V+FPS GERY++
Sbjct: 329 KVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENAGKLITVLFPSHGERYIT 388
Query: 305 SVLFQSIKKEAENM 318
+ LF SI +E + M
Sbjct: 389 TALFSSINREVQEM 402
>AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422
Length = 421
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 158/360 (43%), Gaps = 62/360 (17%)
Query: 4 TIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLI 63
T+ + + IGNTPL+ +N +++ + K E + P SVKDR+ +I +A E G +
Sbjct: 39 TMRNGLVDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIQEALESGKL 98
Query: 64 TPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPL- 122
PG ++ E ++G+T I LA +A A G + + +P ++E+ I++A GA + P+
Sbjct: 99 FPG-GIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPVS 157
Query: 123 ---------LGMKGAVQKAEELAA--------------KTNNS----------------- 142
+ + A +A ELA+ KTN
Sbjct: 158 ITHKDHYVNIARRRA-DEANELASKRRLGSETNGIHQEKTNGCTVEEVKEPSLFSDSVTG 216
Query: 143 -FILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSXXXXXXXXXXXXRYLREQNPDIK 201
F QFEN AN + HYE TGPEIW T G +D V+ R+L+++N +K
Sbjct: 217 GFFADQFENLANYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGTLAGVSRFLQDKNERVK 276
Query: 202 IYGVEPVESAVLSG-----------------GKPGPHKIQGIGAGFVPGVLDVDLINETV 244
+ ++P S + + P +GIG + + ++
Sbjct: 277 CFLIDPPGSGLYNKVTRGVMYTREEAEGRRLKNPFDTITEGIGINRLTKNFLMAKLDGGF 336
Query: 245 QVSSDEAIEMAKALALKEGLLVGISSGXXXXXXVRLAQRPENEGKLFVVVFPSFGERYLS 304
+ + EA+EM++ L +GL VG SS VR+AQ G V + G R+LS
Sbjct: 337 RGTDKEAVEMSRFLLKNDGLFVGSSSAMNCVGAVRVAQ-TLGPGHTIVTILCDSGMRHLS 395
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,385,670
Number of extensions: 244649
Number of successful extensions: 406
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 402
Number of HSP's successfully gapped: 12
Length of query: 321
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 222
Effective length of database: 8,392,385
Effective search space: 1863109470
Effective search space used: 1863109470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 112 (47.8 bits)