Os12g0624800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0624800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.97 | 0.499 | 6.59 | 1.63 | 1.02 | -3.74 | 0.283 | 10.7 | 0.571 | 17 | 0.316 | 1278 | -- | -- |
| 118.7 | 0.507 | 6.7 | 1.14 | 1.05 | -1.57 | 0.468 | -- | 0.6 | 17 | 0.9994 | 80 | -- | -- |
| 113.04 | 0.495 | 6.59 | 1.65 | 1.02 | -3.79 | -- | 10.9 | 0.574 | 16.9 | 0.3802 | 1270 | -- | -- |
| 118.93 | 0.508 | 6.7 | 1.2 | 1.04 | -1.34 | -- | -- | 0.619 | 16.9 | 0.9832 | 94 | -- | -- |
| 167.29 | 0.602 | 6.58 | 1.61 | -- | -4.02 | -- | 11.5 | 0.545 | -- | 0.3941 | 1212 | -- | -- |
| 121.83 | 0.517 | 6.69 | 1.17 | 1.02 | -- | 0.275 | -- | 0.623 | 16.9 | -- | -- | -- | -- |
| 122.02 | 0.517 | 6.69 | 1.17 | 1.02 | -- | -- | -- | 0.624 | 16.9 | -- | -- | -- | -- |
| 175.64 | 0.617 | 6.68 | 1.15 | -- | -0.792 | -- | -- | 0.594 | -- | 0.8254 | 93 | -- | -- |
| 156.38 | 0.582 | 6.72 | -- | 1.01 | -1.06 | -- | -- | 0.489 | 16.9 | 1.266 | 92 | -- | -- |
| 176.85 | 0.621 | 6.68 | 1.13 | -- | -- | -- | -- | 0.598 | -- | -- | -- | -- | -- |
| 158.04 | 0.588 | 6.72 | -- | 0.999 | -- | -- | -- | 0.494 | 16.9 | -- | -- | -- | -- |
| 210.18 | 0.675 | 6.71 | -- | -- | -0.583 | -- | -- | 0.47 | -- | 1.44 | 82 | -- | -- |
| 210.61 | 0.677 | 6.71 | -- | -- | -- | -- | -- | 0.472 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.67 | temperature | 1e+01 | 30 | > th | dose dependent | rect. | 8 | 18 |
| 2 | 107.83 | atmosphere | 1e+03 | 30 | > th | dose dependent | rect. | 2 | 6 |
| 5 | 108.42 | temperature | 3e+01 | 30 | < th | dose dependent | rect. | 2 | 18 |
| 8 | 108.66 | wind | 5e+00 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 12 | 108.92 | wind | 7e+00 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 13 | 108.92 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 19 | 8 |
| 19 | 109.09 | wind | 7e+00 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 20 | 109.09 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 25 | 109.14 | wind | 5e+00 | 14400 | > th | dose dependent | sin | 13 | NA |
| 27 | 109.19 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 28 | 109.19 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 29 | 109.19 | wind | 3e+00 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 30 | 109.21 | humidity | 9e+01 | 90 | < th | dose independent | rect. | 2 | 5 |
| 34 | 109.23 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 36 | 109.24 | wind | 5e+00 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 41 | 109.27 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 42 | 109.27 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 44 | 109.28 | wind | 5e+00 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 46 | 109.31 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 50 | 109.33 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 56 | 109.35 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 59 | 109.36 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 64 | 109.37 | wind | 9e+00 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 73 | 109.39 | wind | 9e+00 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 79 | 109.40 | humidity | 7e+01 | 30 | > th | dose independent | rect. | 17 | 15 |
| 85 | 109.41 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 86 | 109.42 | wind | 7e+00 | 14400 | < th | dose independent | sin | 13 | NA |
| 87 | 109.42 | wind | 9e+00 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 88 | 109.42 | wind | 5e+00 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 91 | 109.43 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 92 | 109.44 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 95 | 109.45 | wind | 9e+00 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 100 | 109.47 | wind | 9e+00 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 101 | 109.47 | wind | 5e+00 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 103 | 109.47 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 105 | 109.49 | wind | 7e+00 | 14400 | > th | dose independent | sin | 13 | NA |
| 109 | 109.49 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 114 | 109.49 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 125 | 109.52 | wind | 9e+00 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 143 | 109.54 | wind | 5e+00 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 181 | 109.62 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 183 | 109.62 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 5 | 13 |
| 206 | 109.67 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 220 | 109.71 | wind | 9e+00 | 14400 | > th | dose dependent | sin | 11 | NA |
| 228 | 109.73 | wind | 7e+00 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 237 | 109.75 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 247 | 109.76 | temperature | 3e+01 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 281 | 109.82 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 300 | 109.85 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 304 | 109.86 | wind | 7e+00 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 342 | 109.90 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 358 | 109.93 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 366 | 109.94 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 380 | 109.95 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 7 | 11 |
| 391 | 109.97 | wind | 9e+00 | 90 | < th | dose dependent | rect. | 8 | 9 |
| 500 | 110.12 | wind | 9e+00 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 612 | 110.29 | wind | 7e+00 | 90 | < th | dose independent | rect. | 8 | 9 |
| 683 | 110.38 | temperature | 1e+01 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 779 | 110.50 | atmosphere | 1e+03 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 824 | 110.55 | atmosphere | 1e+03 | 14400 | < th | dose independent | sin | 23 | NA |
| 871 | 110.59 | atmosphere | 1e+03 | 14400 | > th | dose independent | sin | 23 | NA |