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Os12g0622900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mov34/MPN/PAD-1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.5 (0.0284) R2 : 0.749
β1 : 3.62 (0.104) R2dD : 0.693 R2D : 0.679
β2 : 0.836 (0.0741) R2dC : 0.0704 R2C : 0.0629
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0631 (0.0605) R2dN8 : 0.000801 R2N8 : -0.0079
σ : 0.533
deviance : 129.65
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.13 0.506 9.37 3.98 0.83 -1.06 0.391 -4.9 0.181 18.1 19.35 4730 -- --
123.2 0.517 9.46 3.67 0.889 0.784 0.757 -- 0.182 18.4 15.97 3733 -- --
116.49 0.503 9.37 3.96 0.83 -1.06 -- -4.91 0.18 18.1 19.21 4719 -- --
118.91 0.508 9.48 3.97 0.83 1.32 -- -- 0.144 18.1 16.6 4717 -- --
152.38 0.575 9.35 3.95 -- -1.05 -- -4.96 0.167 -- 19.14 4694 -- --
129.4 0.533 9.5 3.62 0.834 -- 0.32 -- 0.062 18.1 -- -- -- --
129.65 0.533 9.5 3.62 0.836 -- -- -- 0.0631 18.1 -- -- -- --
152.84 0.576 9.51 3.4 -- -0.932 -- -- -0.0838 -- 72.07 345 -- --
292.85 0.797 9.62 -- 0.714 -1.86 -- -- -0.707 17.8 12.71 17696 -- --
165.85 0.602 9.48 3.59 -- -- -- -- 0.0444 -- -- -- -- --
474.71 1.02 9.59 -- 0.785 -- -- -- -0.34 18.3 -- -- -- --
247.51 0.733 9.75 -- -- -2.59 -- -- -1.12 -- 27.9 47520 -- --
506.69 1.05 9.57 -- -- -- -- -- -0.354 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 111.51 radiation 30 43200 > th dose independent rect. 16 1
16 112.56 wind 1 43200 < th dose dependent rect. 12 4
19 112.89 temperature 20 4320 > th dose independent rect. 12 5
20 113.01 humidity 70 43200 > th dose independent rect. 1 7
21 113.01 humidity 70 43200 < th dose independent rect. 1 7
31 113.23 wind 1 43200 < th dose dependent rect. 11 6
34 113.28 radiation 1 14400 < th dose dependent rect. 15 1
39 113.36 temperature 20 4320 < th dose independent rect. 12 5
40 113.37 wind 1 43200 < th dose dependent rect. 9 8
41 113.38 humidity 60 43200 < th dose independent rect. 18 16
43 113.45 radiation 1 14400 < th dose dependent rect. 6 11
46 113.48 humidity 60 43200 > th dose independent rect. 18 16
47 113.51 temperature 20 4320 < th dose independent rect. 15 2
62 113.61 humidity 50 43200 > th dose independent rect. 15 22
67 113.65 wind 1 43200 < th dose dependent rect. 15 1
75 113.71 humidity 70 43200 < th dose dependent rect. 7 1
81 113.76 wind 1 43200 < th dose independent rect. 12 4
84 113.78 temperature 20 14400 < th dose dependent rect. 5 7
86 113.79 humidity 70 43200 < th dose dependent rect. 1 8
88 113.79 temperature 20 14400 < th dose dependent rect. 5 20
102 113.82 humidity 60 43200 < th dose dependent rect. 10 1
104 113.82 temperature 20 14400 < th dose dependent rect. 4 17
133 113.88 wind 1 43200 > th dose independent rect. 12 4
135 113.88 radiation 1 14400 > th dose independent rect. 8 8
137 113.88 temperature 20 14400 < th dose dependent sin 1 NA
153 113.90 humidity 50 43200 < th dose independent rect. 15 22
156 113.90 temperature 20 14400 < th dose dependent rect. 15 11
164 113.90 temperature 20 14400 < th dose dependent rect. 15 21
175 113.91 temperature 20 14400 < th dose dependent sin 16 NA
177 113.91 temperature 20 14400 < th dose dependent no NA NA
183 113.91 humidity 60 43200 < th dose dependent rect. 24 13
197 113.92 humidity 60 43200 < th dose dependent rect. 2 11
216 113.92 temperature 20 14400 < th dose dependent rect. 22 23
231 113.93 temperature 20 14400 < th dose dependent rect. 9 23
236 113.94 radiation 1 14400 < th dose independent rect. 8 8
270 113.95 humidity 60 43200 < th dose dependent rect. 17 20
277 113.96 temperature 20 14400 < th dose dependent rect. 6 3
296 113.97 temperature 20 14400 < th dose dependent rect. 23 1
297 113.97 temperature 20 14400 < th dose dependent rect. 22 3
298 113.97 wind 1 43200 < th dose dependent rect. 9 10
327 113.99 wind 1 43200 < th dose dependent rect. 9 1
372 114.02 humidity 60 43200 < th dose dependent sin 7 NA
375 114.02 humidity 60 43200 < th dose dependent rect. 7 5
401 114.04 humidity 90 14400 > th dose dependent rect. 12 1
478 114.10 humidity 50 43200 < th dose independent rect. 10 1
479 114.10 wind 1 43200 < th dose independent rect. 12 2
493 114.11 temperature 20 4320 < th dose dependent sin 20 NA
506 114.12 wind 1 43200 < th dose independent rect. 9 1
545 114.15 wind 1 43200 < th dose dependent rect. 9 5
606 114.22 radiation 1 14400 < th dose dependent rect. 9 8
624 114.26 wind 1 43200 > th dose independent rect. 9 1
625 114.26 humidity 50 43200 > th dose independent rect. 9 2
660 114.33 wind 7 14400 > th dose independent rect. 23 1
715 114.40 humidity 50 43200 > th dose independent sin 16 NA
719 114.40 wind 1 43200 < th dose independent rect. 9 8
730 114.41 humidity 50 43200 > th dose independent rect. 2 17
789 114.47 humidity 50 43200 > th dose independent no NA NA
834 114.49 humidity 50 43200 > th dose independent rect. 13 19
837 114.49 humidity 50 43200 > th dose independent rect. 9 23
842 114.50 wind 1 43200 < th dose independent rect. 14 2
866 114.52 radiation 1 14400 < th dose independent rect. 9 4
876 114.53 radiation 1 14400 > th dose independent rect. 9 4
914 114.55 temperature 20 14400 < th dose dependent rect. 19 1
917 114.56 humidity 50 43200 < th dose independent sin 15 NA
944 114.58 humidity 50 43200 > th dose independent sin 8 NA
983 114.61 wind 9 14400 > th dose dependent rect. 23 2