Os12g0621900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0621900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.44 | 0.276 | 11.2 | 0.11 | 0.373 | -1.07 | 0.911 | 0.208 | 0.0325 | 8.57 | 24.69 | 787 | -- | -- |
| 34.5 | 0.274 | 11.2 | 0.14 | 0.374 | -1.08 | 0.958 | -- | 0.0432 | 8.6 | 24.71 | 790 | -- | -- |
| 36.77 | 0.282 | 11.2 | 0.0518 | 0.367 | -1.05 | -- | 0.706 | 0.00827 | 8.39 | 24.8 | 782 | -- | -- |
| 37.45 | 0.285 | 11.2 | 0.173 | 0.371 | -1.1 | -- | -- | 0.0413 | 8.38 | 24.5 | 784 | -- | -- |
| 43.38 | 0.307 | 11.2 | 0.168 | -- | -0.989 | -- | 0.196 | 0.0568 | -- | 24.8 | 1193 | -- | -- |
| 52.17 | 0.339 | 11.1 | 0.456 | 0.251 | -- | 1.01 | -- | 0.264 | 8.17 | -- | -- | -- | -- |
| 55 | 0.347 | 11.1 | 0.482 | 0.264 | -- | -- | -- | 0.261 | 7.2 | -- | -- | -- | -- |
| 43.36 | 0.307 | 11.2 | 0.174 | -- | -1.05 | -- | -- | 0.0486 | -- | 24.7 | 1223 | -- | -- |
| 38.14 | 0.288 | 11.2 | -- | 0.378 | -1.18 | -- | -- | 0.00916 | 8.45 | 24.5 | 801 | -- | -- |
| 58.69 | 0.358 | 11.2 | 0.487 | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
| 61.13 | 0.366 | 11.2 | -- | 0.269 | -- | -- | -- | 0.208 | 7.08 | -- | -- | -- | -- |
| 44.04 | 0.309 | 11.2 | -- | -- | -1.14 | -- | -- | 0.0144 | -- | 24.7 | 1236 | -- | -- |
| 64.95 | 0.376 | 11.2 | -- | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 2 | 33.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 13 | 34.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 17 | 34.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 28 | 34.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 33 | 34.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 39 | 34.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 83 | 34.55 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 87 | 34.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 90 | 34.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 118 | 34.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 123 | 34.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 144 | 34.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 157 | 34.92 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 189 | 35.10 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 193 | 35.10 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 224 | 35.23 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 234 | 35.27 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 253 | 35.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 308 | 35.57 | temperature | 25 | 720 | < th | dose dependent | sin | 1 | NA |
| 467 | 36.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 552 | 36.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 554 | 36.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 604 | 36.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 750 | 37.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 770 | 37.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 948 | 37.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 19 |