Os12g0621100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Filamentous flower-like yabby protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os12g0621100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Filamentous flower-like yabby protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.17 | 0.349 | 9.27 | -0.768 | 0.108 | 0.288 | -0.555 | 1.13 | -0.469 | 8.64 | 24.8 | 240 | -- | -- |
| 58.85 | 0.357 | 9.24 | -0.415 | 0.0659 | 0.374 | -0.47 | -- | -0.337 | 9.41 | 24.5 | 222 | -- | -- |
| 55.38 | 0.347 | 9.27 | -0.781 | 0.181 | 0.25 | -- | 1.03 | -0.48 | 6.11 | 24.56 | 207 | -- | -- |
| 59.23 | 0.358 | 9.24 | -0.463 | 0.165 | 0.298 | -- | -- | -0.368 | 6.08 | 24.59 | 225 | -- | -- |
| 56.74 | 0.351 | 9.27 | -0.762 | -- | 0.315 | -- | 1.05 | -0.452 | -- | 24.6 | 212 | -- | -- |
| 62.9 | 0.372 | 9.27 | -0.546 | 0.313 | -- | 0.857 | -- | -0.523 | 4.28 | -- | -- | -- | -- |
| 64.42 | 0.376 | 9.27 | -0.553 | 0.338 | -- | -- | -- | -0.527 | 5.33 | -- | -- | -- | -- |
| 60.34 | 0.362 | 9.23 | -0.433 | -- | 0.37 | -- | -- | -0.335 | -- | 24.63 | 238 | -- | -- |
| 64.4 | 0.374 | 9.22 | -- | 0.119 | 0.372 | -- | -- | -0.285 | 6.76 | 24.5 | 235 | -- | -- |
| 70.38 | 0.392 | 9.28 | -0.541 | -- | -- | -- | -- | -0.519 | -- | -- | -- | -- | -- |
| 72.48 | 0.398 | 9.26 | -- | 0.329 | -- | -- | -- | -0.466 | 5.4 | -- | -- | -- | -- |
| 65.1 | 0.376 | 9.21 | -- | -- | 0.412 | -- | -- | -0.264 | -- | 24.6 | 235 | -- | -- |
| 78.12 | 0.413 | 9.26 | -- | -- | -- | -- | -- | -0.459 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.97 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 2 | 50.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 4 | 50.67 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 8 | 50.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 16 | 51.01 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 19 | 51.07 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 27 | 51.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 30 | 51.27 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 31 | 51.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 33 | 51.36 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 35 | 51.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 38 | 51.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 49 | 51.59 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 54 | 51.65 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 60 | 51.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 66 | 51.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 70 | 51.78 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 86 | 51.89 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 22 |
| 90 | 51.93 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 102 | 52.02 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 103 | 52.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 106 | 52.07 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 9 |
| 107 | 52.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 113 | 52.10 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 123 | 52.15 | temperature | 25.0 | 270 | < th | dose independent | sin | 7 | NA |
| 141 | 52.26 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 165 | 52.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 178 | 52.50 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 15 |
| 185 | 52.54 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 189 | 52.56 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 14 |
| 216 | 52.68 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 219 | 52.70 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 268 | 52.92 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 270 | 52.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 284 | 52.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 303 | 53.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 312 | 53.05 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 337 | 53.13 | temperature | 30.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 343 | 53.14 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 358 | 53.17 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 379 | 53.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 387 | 53.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 411 | 53.29 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 456 | 53.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 468 | 53.42 | temperature | 30.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 472 | 53.43 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 474 | 53.43 | wind | 9.0 | 10 | < th | dose dependent | rect. | 10 | 17 |
| 518 | 53.53 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 527 | 53.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 561 | 53.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 579 | 53.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 585 | 53.64 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 595 | 53.68 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 597 | 53.68 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 645 | 53.76 | temperature | 25.0 | 270 | > th | dose independent | sin | 7 | NA |
| 671 | 53.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 6 |
| 677 | 53.83 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 718 | 53.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 742 | 53.96 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 743 | 53.96 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 745 | 53.96 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 747 | 53.96 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 749 | 53.96 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 762 | 53.97 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 767 | 53.98 | temperature | 10.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 885 | 54.17 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 15 |
| 891 | 54.17 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 911 | 54.20 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 923 | 54.21 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 958 | 54.27 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 971 | 54.28 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 976 | 54.29 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 983 | 54.30 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 22 |